Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6aP27664 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6aP27664 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.35■□□□□ 0.69
Pde6aP27664 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6aP27664 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6aP27664 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pde6aP27664 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6aP27664 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6aP27664 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.34■□□□□ 0.69
Pde6aP27664 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6aP27664 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.34■□□□□ 0.69
Pde6aP27664 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6aP27664 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6aP27664 Gm9013-201ENSMUST00000132939 882 ntBASIC19.34■□□□□ 0.69
Pde6aP27664 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6aP27664 Gm6345-202ENSMUST00000180900 204 ntBASIC19.34■□□□□ 0.69
Pde6aP27664 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.34■□□□□ 0.69
Pde6aP27664 Gm29707-201ENSMUST00000196325 491 ntBASIC19.34■□□□□ 0.69
Pde6aP27664 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6aP27664 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.34■□□□□ 0.69
Pde6aP27664 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6aP27664 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.34■□□□□ 0.69
Pde6aP27664 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pde6aP27664 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6aP27664 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Pde6aP27664 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Pde6aP27664 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6aP27664 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6aP27664 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pde6aP27664 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pde6aP27664 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pde6aP27664 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pde6aP27664 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pde6aP27664 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pde6aP27664 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Pde6aP27664 AA414768-201ENSMUST00000121924 1257 ntBASIC19.33■□□□□ 0.68
Pde6aP27664 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.33■□□□□ 0.68
Pde6aP27664 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6aP27664 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.33■□□□□ 0.68
Pde6aP27664 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Pde6aP27664 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6aP27664 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6aP27664 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6aP27664 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6aP27664 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6aP27664 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6aP27664 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6aP27664 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Pde6aP27664 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pde6aP27664 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6aP27664 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6aP27664 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6aP27664 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6aP27664 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6aP27664 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.32■□□□□ 0.68
Pde6aP27664 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6aP27664 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pde6aP27664 Mir770-201ENSMUST00000103252 94 ntBASIC19.32■□□□□ 0.68
Pde6aP27664 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.32■□□□□ 0.68
Pde6aP27664 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6aP27664 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6aP27664 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6aP27664 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6aP27664 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6aP27664 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6aP27664 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pde6aP27664 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pde6aP27664 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pde6aP27664 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pde6aP27664 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6aP27664 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6aP27664 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Pde6aP27664 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6aP27664 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6aP27664 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6aP27664 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6aP27664 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pde6aP27664 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6aP27664 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.31■□□□□ 0.68
Pde6aP27664 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.31■□□□□ 0.68
Pde6aP27664 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6aP27664 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pde6aP27664 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6aP27664 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6aP27664 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6aP27664 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6aP27664 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6aP27664 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6aP27664 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pde6aP27664 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pde6aP27664 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6aP27664 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Pde6aP27664 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6aP27664 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.3■□□□□ 0.68
Pde6aP27664 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pde6aP27664 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6aP27664 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6aP27664 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Pde6aP27664 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pde6aP27664 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms