Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.25■□□□□ 0.03
Cbx3P23198 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cbx3P23198 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cbx3P23198 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cbx3P23198 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cbx3P23198 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cbx3P23198 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.24■□□□□ 0.03
Cbx3P23198 Gm27032-201ENSMUST00000183124 1116 ntBASIC15.24■□□□□ 0.03
Cbx3P23198 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.24■□□□□ 0.03
Cbx3P23198 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cbx3P23198 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.24■□□□□ 0.03
Cbx3P23198 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.23■□□□□ 0.03
Cbx3P23198 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cbx3P23198 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cbx3P23198 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.23■□□□□ 0.03
Cbx3P23198 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.23■□□□□ 0.03
Cbx3P23198 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cbx3P23198 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cbx3P23198 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cbx3P23198 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.23■□□□□ 0.03
Cbx3P23198 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.23■□□□□ 0.03
Cbx3P23198 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cbx3P23198 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cbx3P23198 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cbx3P23198 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cbx3P23198 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.23■□□□□ 0.03
Cbx3P23198 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cbx3P23198 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cbx3P23198 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Cbx3P23198 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Cbx3P23198 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cbx3P23198 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cbx3P23198 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cbx3P23198 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cbx3P23198 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cbx3P23198 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cbx3P23198 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cbx3P23198 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cbx3P23198 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Cbx3P23198 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Cbx3P23198 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
Cbx3P23198 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.22■□□□□ 0.03
Cbx3P23198 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.22■□□□□ 0.03
Cbx3P23198 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.22■□□□□ 0.03
Cbx3P23198 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cbx3P23198 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
Cbx3P23198 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cbx3P23198 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cbx3P23198 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cbx3P23198 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cbx3P23198 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.21■□□□□ 0.03
Cbx3P23198 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cbx3P23198 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cbx3P23198 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cbx3P23198 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms