Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp53P15975 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Usp53P15975 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Usp53P15975 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp53P15975 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp53P15975 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.29■□□□□ 0.68
Usp53P15975 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp53P15975 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Usp53P15975 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Usp53P15975 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Usp53P15975 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp53P15975 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp53P15975 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp53P15975 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.28■□□□□ 0.68
Usp53P15975 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.28■□□□□ 0.68
Usp53P15975 Gm18669-201ENSMUST00000216049 778 ntBASIC19.28■□□□□ 0.68
Usp53P15975 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp53P15975 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Usp53P15975 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Usp53P15975 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp53P15975 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp53P15975 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp53P15975 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Usp53P15975 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.27■□□□□ 0.68
Usp53P15975 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.27■□□□□ 0.68
Usp53P15975 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.27■□□□□ 0.68
Usp53P15975 Gm27357-201ENSMUST00000183754 135 ntBASIC19.27■□□□□ 0.68
Usp53P15975 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.27■□□□□ 0.68
Usp53P15975 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp53P15975 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp53P15975 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp53P15975 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp53P15975 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp53P15975 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Usp53P15975 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.27■□□□□ 0.67
Usp53P15975 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usp53P15975 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp53P15975 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Usp53P15975 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp53P15975 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.26■□□□□ 0.67
Usp53P15975 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.26■□□□□ 0.67
Usp53P15975 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Usp53P15975 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp53P15975 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp53P15975 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp53P15975 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Usp53P15975 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp53P15975 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp53P15975 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Usp53P15975 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.26■□□□□ 0.67
Usp53P15975 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp53P15975 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.26■□□□□ 0.67
Usp53P15975 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp53P15975 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp53P15975 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.26■□□□□ 0.67
Usp53P15975 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.26■□□□□ 0.67
Usp53P15975 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.26■□□□□ 0.67
Usp53P15975 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp53P15975 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Usp53P15975 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Usp53P15975 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp53P15975 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp53P15975 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Usp53P15975 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp53P15975 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp53P15975 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp53P15975 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.25■□□□□ 0.67
Usp53P15975 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp53P15975 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp53P15975 Gm17971-201ENSMUST00000190239 806 ntBASIC19.25■□□□□ 0.67
Usp53P15975 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Usp53P15975 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.25■□□□□ 0.67
Usp53P15975 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp53P15975 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp53P15975 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp53P15975 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp53P15975 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp53P15975 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp53P15975 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Usp53P15975 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Usp53P15975 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.24■□□□□ 0.67
Usp53P15975 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp53P15975 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Usp53P15975 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Usp53P15975 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp53P15975 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Usp53P15975 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp53P15975 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp53P15975 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Usp53P15975 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Usp53P15975 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp53P15975 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp53P15975 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp53P15975 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp53P15975 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp53P15975 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp53P15975 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp53P15975 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Usp53P15975 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp53P15975 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms