Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.84□□□□□ -0.19
Cxcl1P12850 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl1P12850 Gm37179-201ENSMUST00000194862 823 ntBASIC13.84□□□□□ -0.19
Cxcl1P12850 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl1P12850 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl1P12850 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl1P12850 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl1P12850 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cxcl1P12850 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl1P12850 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.84□□□□□ -0.19
Cxcl1P12850 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl1P12850 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cxcl1P12850 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl1P12850 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cxcl1P12850 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl1P12850 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cxcl1P12850 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cxcl1P12850 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cxcl1P12850 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cxcl1P12850 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cxcl1P12850 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cxcl1P12850 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.83□□□□□ -0.2
Cxcl1P12850 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.83□□□□□ -0.2
Cxcl1P12850 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl1P12850 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl1P12850 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl1P12850 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl1P12850 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl1P12850 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl1P12850 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cxcl1P12850 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.83□□□□□ -0.2
Cxcl1P12850 Gm27000-201ENSMUST00000182943 842 ntBASIC13.83□□□□□ -0.2
Cxcl1P12850 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl1P12850 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cxcl1P12850 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl1P12850 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl1P12850 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.83□□□□□ -0.2
Cxcl1P12850 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl1P12850 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl1P12850 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cxcl1P12850 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cxcl1P12850 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cxcl1P12850 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.82□□□□□ -0.2
Cxcl1P12850 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.82□□□□□ -0.2
Cxcl1P12850 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.82□□□□□ -0.2
Cxcl1P12850 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.82□□□□□ -0.2
Cxcl1P12850 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cxcl1P12850 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cxcl1P12850 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.82□□□□□ -0.2
Cxcl1P12850 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.81□□□□□ -0.2
Cxcl1P12850 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.81□□□□□ -0.2
Cxcl1P12850 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Cxcl1P12850 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 Gm27275-201ENSMUST00000184318 272 ntBASIC13.81□□□□□ -0.2
Cxcl1P12850 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cxcl1P12850 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cxcl1P12850 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Cxcl1P12850 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Cxcl1P12850 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.8□□□□□ -0.2
Cxcl1P12850 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.8□□□□□ -0.2
Cxcl1P12850 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.8□□□□□ -0.2
Cxcl1P12850 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cxcl1P12850 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms