Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.48■□□□□ 0.55
Hoxc6P10629 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Hoxc6P10629 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hoxc6P10629 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hoxc6P10629 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hoxc6P10629 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Hoxc6P10629 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxc6P10629 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.47■□□□□ 0.55
Hoxc6P10629 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxc6P10629 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxc6P10629 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxc6P10629 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.47■□□□□ 0.55
Hoxc6P10629 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.47■□□□□ 0.55
Hoxc6P10629 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Hoxc6P10629 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.47■□□□□ 0.55
Hoxc6P10629 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxc6P10629 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxc6P10629 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxc6P10629 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxc6P10629 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxc6P10629 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxc6P10629 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxc6P10629 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxc6P10629 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.47■□□□□ 0.55
Hoxc6P10629 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Hoxc6P10629 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Hoxc6P10629 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.46■□□□□ 0.55
Hoxc6P10629 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.46■□□□□ 0.55
Hoxc6P10629 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc6P10629 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc6P10629 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc6P10629 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc6P10629 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Hoxc6P10629 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc6P10629 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Hoxc6P10629 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc6P10629 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc6P10629 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc6P10629 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc6P10629 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc6P10629 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.46■□□□□ 0.55
Hoxc6P10629 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.46■□□□□ 0.55
Hoxc6P10629 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.46■□□□□ 0.55
Hoxc6P10629 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Hoxc6P10629 Gm5364-201ENSMUST00000216789 889 ntBASIC18.46■□□□□ 0.55
Hoxc6P10629 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Hoxc6P10629 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc6P10629 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Hoxc6P10629 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc6P10629 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.46■□□□□ 0.55
Hoxc6P10629 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Hoxc6P10629 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Hoxc6P10629 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc6P10629 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.45■□□□□ 0.54
Hoxc6P10629 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc6P10629 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc6P10629 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Hoxc6P10629 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.45■□□□□ 0.54
Hoxc6P10629 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.45■□□□□ 0.54
Hoxc6P10629 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc6P10629 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Hoxc6P10629 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc6P10629 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc6P10629 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Hoxc6P10629 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hoxc6P10629 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Hoxc6P10629 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc6P10629 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Hoxc6P10629 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.44■□□□□ 0.54
Hoxc6P10629 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc6P10629 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc6P10629 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Hoxc6P10629 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc6P10629 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc6P10629 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc6P10629 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc6P10629 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Hoxc6P10629 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc6P10629 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
Hoxc6P10629 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.44■□□□□ 0.54
Hoxc6P10629 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.44■□□□□ 0.54
Hoxc6P10629 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc6P10629 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc6P10629 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Hoxc6P10629 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc6P10629 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc6P10629 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hoxc6P10629 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc6P10629 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Hoxc6P10629 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Hoxc6P10629 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc6P10629 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc6P10629 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc6P10629 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc6P10629 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.43■□□□□ 0.54
Hoxc6P10629 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc6P10629 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc6P10629 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.43■□□□□ 0.54
Hoxc6P10629 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hoxc6P10629 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms