Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ApoeP08226 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ApoeP08226 Dio3-201ENSMUST00000097228 1449 ntBASIC15.82■□□□□ 0.12
ApoeP08226 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ApoeP08226 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ApoeP08226 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ApoeP08226 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ApoeP08226 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ApoeP08226 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ApoeP08226 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ApoeP08226 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ApoeP08226 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ApoeP08226 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ApoeP08226 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.81■□□□□ 0.12
ApoeP08226 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ApoeP08226 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ApoeP08226 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ApoeP08226 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ApoeP08226 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.81■□□□□ 0.12
ApoeP08226 Mir5133-201ENSMUST00000174955 77 ntBASIC15.81■□□□□ 0.12
ApoeP08226 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ApoeP08226 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ApoeP08226 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ApoeP08226 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.81■□□□□ 0.12
ApoeP08226 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ApoeP08226 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ApoeP08226 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ApoeP08226 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ApoeP08226 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
ApoeP08226 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ApoeP08226 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ApoeP08226 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ApoeP08226 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ApoeP08226 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
ApoeP08226 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ApoeP08226 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ApoeP08226 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.8■□□□□ 0.12
ApoeP08226 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.8■□□□□ 0.12
ApoeP08226 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ApoeP08226 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.8■□□□□ 0.12
ApoeP08226 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ApoeP08226 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.8■□□□□ 0.12
ApoeP08226 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ApoeP08226 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ApoeP08226 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.8■□□□□ 0.12
ApoeP08226 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ApoeP08226 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ApoeP08226 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.8■□□□□ 0.12
ApoeP08226 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ApoeP08226 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.8■□□□□ 0.12
ApoeP08226 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.8■□□□□ 0.12
ApoeP08226 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ApoeP08226 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ApoeP08226 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ApoeP08226 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.8■□□□□ 0.12
ApoeP08226 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
ApoeP08226 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
ApoeP08226 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ApoeP08226 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
ApoeP08226 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.79■□□□□ 0.12
ApoeP08226 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
ApoeP08226 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Gm24841-201ENSMUST00000158676 357 ntBASIC15.79■□□□□ 0.12
ApoeP08226 Gm26571-201ENSMUST00000181399 666 ntBASIC15.79■□□□□ 0.12
ApoeP08226 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.79■□□□□ 0.12
ApoeP08226 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
ApoeP08226 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
ApoeP08226 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ApoeP08226 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.79■□□□□ 0.12
ApoeP08226 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ApoeP08226 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ApoeP08226 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ApoeP08226 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ApoeP08226 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ApoeP08226 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ApoeP08226 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
ApoeP08226 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ApoeP08226 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ApoeP08226 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ApoeP08226 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
ApoeP08226 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ApoeP08226 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ApoeP08226 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
ApoeP08226 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms