Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Gm10698-201ENSMUST00000182663 604 ntBASIC12.23□□□□□ -0.45
P06328 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.23□□□□□ -0.45
P06328 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.23□□□□□ -0.45
P06328 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06328 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06328 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P06328 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P06328 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06328 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06328 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P06328 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
P06328 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06328 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P06328 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
P06328 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.23□□□□□ -0.45
P06328 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
P06328 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06328 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
P06328 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
P06328 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Gm12085-201ENSMUST00000119263 940 ntBASIC12.22□□□□□ -0.45
P06328 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.22□□□□□ -0.45
P06328 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.22□□□□□ -0.45
P06328 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
P06328 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06328 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.21□□□□□ -0.45
P06328 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06328 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
P06328 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.21□□□□□ -0.45
P06328 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06328 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P06328 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06328 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06328 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.21□□□□□ -0.45
P06328 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06328 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.21□□□□□ -0.45
P06328 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
P06328 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
P06328 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06328 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
P06328 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.21□□□□□ -0.45
P06328 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P06328 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P06328 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.21□□□□□ -0.45
P06328 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06328 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06328 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.21□□□□□ -0.45
P06328 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06328 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06328 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06328 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06328 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
P06328 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.21□□□□□ -0.46
P06328 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
P06328 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06328 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
P06328 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06328 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.2□□□□□ -0.46
P06328 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06328 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P06328 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
P06328 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06328 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06328 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06328 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
P06328 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06328 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06328 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
P06328 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06328 Gm15039-201ENSMUST00000118914 875 ntBASIC12.2□□□□□ -0.46
P06328 Gm7638-201ENSMUST00000121348 967 ntBASIC12.2□□□□□ -0.46
P06328 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P06328 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06328 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
P06328 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.2□□□□□ -0.46
P06328 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
P06328 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06328 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.2□□□□□ -0.46
P06328 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P06328 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms