Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
P04940 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P04940 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
P04940 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P04940 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P04940 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.53□□□□□ -0.24
P04940 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P04940 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
P04940 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.52□□□□□ -0.24
P04940 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
P04940 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.52□□□□□ -0.24
P04940 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
P04940 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
P04940 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P04940 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P04940 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.52□□□□□ -0.24
P04940 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.52□□□□□ -0.24
P04940 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P04940 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Gm6433-201ENSMUST00000118634 875 ntBASIC13.52□□□□□ -0.25
P04940 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.52□□□□□ -0.25
P04940 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.52□□□□□ -0.25
P04940 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.52□□□□□ -0.25
P04940 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.52□□□□□ -0.25
P04940 Gm10566-201ENSMUST00000086739 996 ntBASIC13.52□□□□□ -0.25
P04940 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
P04940 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
P04940 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.52□□□□□ -0.25
P04940 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P04940 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
P04940 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.51□□□□□ -0.25
P04940 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
P04940 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.51□□□□□ -0.25
P04940 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.51□□□□□ -0.25
P04940 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Mir6982-201ENSMUST00000184354 68 ntBASIC13.51□□□□□ -0.25
P04940 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.51□□□□□ -0.25
P04940 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
P04940 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
P04940 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
P04940 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
P04940 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
P04940 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P04940 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.5□□□□□ -0.25
P04940 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.5□□□□□ -0.25
P04940 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 Gm26039-201ENSMUST00000158152 144 ntBASIC13.5□□□□□ -0.25
P04940 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
P04940 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
P04940 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.5□□□□□ -0.25
P04940 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
P04940 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
P04940 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.5□□□□□ -0.25
P04940 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
P04940 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms