Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
P04214 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04214 Gm4459-201ENSMUST00000118750 468 ntBASIC17.45■□□□□ 0.38
P04214 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
P04214 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
P04214 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04214 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04214 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04214 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04214 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04214 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04214 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
P04214 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04214 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
P04214 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04214 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04214 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04214 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.44■□□□□ 0.38
P04214 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.44■□□□□ 0.38
P04214 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04214 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04214 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04214 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04214 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04214 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04214 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P04214 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04214 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04214 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04214 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04214 Gm14822-201ENSMUST00000122247 291 ntBASIC17.43■□□□□ 0.38
P04214 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.43■□□□□ 0.38
P04214 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.43■□□□□ 0.38
P04214 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.43■□□□□ 0.38
P04214 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04214 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P04214 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04214 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04214 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.43■□□□□ 0.38
P04214 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P04214 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
P04214 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P04214 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P04214 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P04214 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
P04214 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04214 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
P04214 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
P04214 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.42■□□□□ 0.38
P04214 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.42■□□□□ 0.38
P04214 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.42■□□□□ 0.38
P04214 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
P04214 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04214 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.42■□□□□ 0.38
P04214 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
P04214 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.42■□□□□ 0.38
P04214 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04214 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04214 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
P04214 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04214 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04214 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P04214 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04214 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
P04214 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.41■□□□□ 0.38
P04214 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.41■□□□□ 0.38
P04214 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04214 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P04214 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.41■□□□□ 0.38
P04214 Gm8655-201ENSMUST00000221159 852 ntBASIC17.41■□□□□ 0.38
P04214 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.41■□□□□ 0.38
P04214 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04214 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04214 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04214 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
P04214 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04214 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04214 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04214 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
P04214 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P04214 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P04214 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
P04214 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04214 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04214 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.4■□□□□ 0.38
P04214 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04214 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.4■□□□□ 0.38
P04214 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
P04214 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
P04214 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.4■□□□□ 0.38
P04214 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04214 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04214 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
P04214 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
P04214 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04214 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04214 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P04214 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.4■□□□□ 0.38
P04214 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
P04214 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms