Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.24■□□□□ 0.03
P01852 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
P01852 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01852 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01852 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01852 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
P01852 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
P01852 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01852 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01852 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01852 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01852 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
P01852 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 Dancr-204ENSMUST00000132389 2347 ntBASIC15.23■□□□□ 0.03
P01852 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
P01852 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
P01852 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
P01852 Actl10-202ENSMUST00000226583 1501 ntBASIC15.23■□□□□ 0.03
P01852 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.23■□□□□ 0.03
P01852 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 Gm6659-201ENSMUST00000174752 547 ntBASIC15.23■□□□□ 0.03
P01852 Gm21559-201ENSMUST00000220638 855 ntBASIC15.23■□□□□ 0.03
P01852 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 Gm8587-201ENSMUST00000076538 843 ntBASIC15.23■□□□□ 0.03
P01852 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
P01852 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
P01852 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
P01852 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
P01852 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
P01852 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
P01852 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P01852 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P01852 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P01852 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.22■□□□□ 0.03
P01852 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
P01852 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
P01852 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P01852 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
P01852 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
P01852 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
P01852 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.22■□□□□ 0.03
P01852 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
P01852 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P01852 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P01852 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P01852 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P01852 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P01852 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
P01852 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
P01852 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
P01852 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P01852 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P01852 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
P01852 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
P01852 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P01852 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P01852 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P01852 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.21■□□□□ 0.03
P01852 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P01852 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P01852 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P01852 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.21■□□□□ 0.03
P01852 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
P01852 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P01852 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P01852 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P01852 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P01852 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
P01852 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
P01852 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
P01852 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
P01852 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.21■□□□□ 0.02
P01852 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
P01852 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
P01852 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
P01852 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P01852 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P01852 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.2■□□□□ 0.02
P01852 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P01852 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P01852 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P01852 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
P01852 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P01852 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
P01852 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
P01852 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms