Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
P01788 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.21□□□□□ -0.29
P01788 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
P01788 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
P01788 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 Gm12382-201ENSMUST00000122005 922 ntBASIC13.21□□□□□ -0.29
P01788 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
P01788 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
P01788 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.21□□□□□ -0.29
P01788 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
P01788 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
P01788 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
P01788 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P01788 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
P01788 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
P01788 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
P01788 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.21□□□□□ -0.3
P01788 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
P01788 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.2□□□□□ -0.3
P01788 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.2□□□□□ -0.3
P01788 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
P01788 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.2□□□□□ -0.3
P01788 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.2□□□□□ -0.3
P01788 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
P01788 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
P01788 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
P01788 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
P01788 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
P01788 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P01788 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
P01788 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
P01788 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01788 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01788 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01788 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P01788 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P01788 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
P01788 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.19□□□□□ -0.3
P01788 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01788 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.19□□□□□ -0.3
P01788 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01788 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01788 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
P01788 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01788 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01788 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
P01788 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.19□□□□□ -0.3
P01788 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
P01788 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
P01788 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
P01788 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01788 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01788 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01788 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
P01788 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01788 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
P01788 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P01788 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01788 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.18□□□□□ -0.3
P01788 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
P01788 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01788 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01788 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
P01788 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
P01788 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms