Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abcd4O89016 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Abcd4O89016 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Abcd4O89016 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abcd4O89016 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abcd4O89016 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abcd4O89016 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Abcd4O89016 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abcd4O89016 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.1■□□□□ 0.01
Abcd4O89016 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.1■□□□□ 0.01
Abcd4O89016 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Abcd4O89016 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Abcd4O89016 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abcd4O89016 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abcd4O89016 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abcd4O89016 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abcd4O89016 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Abcd4O89016 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.09■□□□□ 0.01
Abcd4O89016 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abcd4O89016 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abcd4O89016 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Abcd4O89016 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Abcd4O89016 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abcd4O89016 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abcd4O89016 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abcd4O89016 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Abcd4O89016 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Abcd4O89016 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abcd4O89016 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Abcd4O89016 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.09■□□□□ 0.01
Abcd4O89016 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.08■□□□□ 0.01
Abcd4O89016 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.08■□□□□ 0.01
Abcd4O89016 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Abcd4O89016 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Abcd4O89016 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Abcd4O89016 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.08■□□□□ 0
Abcd4O89016 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Abcd4O89016 Gm11355-201ENSMUST00000121120 306 ntBASIC15.08■□□□□ 0
Abcd4O89016 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.08■□□□□ 0
Abcd4O89016 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.08■□□□□ 0
Abcd4O89016 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.08■□□□□ 0
Abcd4O89016 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Abcd4O89016 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Abcd4O89016 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Abcd4O89016 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Abcd4O89016 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.08■□□□□ 0
Abcd4O89016 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.08■□□□□ 0
Abcd4O89016 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Abcd4O89016 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Abcd4O89016 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Abcd4O89016 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Abcd4O89016 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.07■□□□□ 0
Abcd4O89016 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Abcd4O89016 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abcd4O89016 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Abcd4O89016 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Abcd4O89016 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abcd4O89016 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.07■□□□□ 0
Abcd4O89016 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Abcd4O89016 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Abcd4O89016 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abcd4O89016 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abcd4O89016 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abcd4O89016 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.07■□□□□ 0
Abcd4O89016 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abcd4O89016 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Abcd4O89016 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Abcd4O89016 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Abcd4O89016 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Abcd4O89016 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.07■□□□□ 0
Abcd4O89016 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Abcd4O89016 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.06■□□□□ 0
Abcd4O89016 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.06■□□□□ 0
Abcd4O89016 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 Gm26039-201ENSMUST00000158152 144 ntBASIC15.06■□□□□ 0
Abcd4O89016 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.06■□□□□ 0
Abcd4O89016 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.06■□□□□ 0
Abcd4O89016 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.06■□□□□ 0
Abcd4O89016 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Abcd4O89016 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Abcd4O89016 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ 0
Abcd4O89016 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.05■□□□□ 0
Abcd4O89016 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Abcd4O89016 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms