Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
Hdac3O88895 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac3O88895 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac3O88895 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Hdac3O88895 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac3O88895 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac3O88895 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac3O88895 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac3O88895 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac3O88895 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac3O88895 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac3O88895 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac3O88895 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Hdac3O88895 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Hdac3O88895 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Hdac3O88895 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac3O88895 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Hdac3O88895 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac3O88895 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac3O88895 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac3O88895 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Hdac3O88895 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac3O88895 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac3O88895 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac3O88895 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.91□□□□□ -0.02
Hdac3O88895 Gm715-201ENSMUST00000117865 831 ntBASIC14.91□□□□□ -0.02
Hdac3O88895 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.91□□□□□ -0.02
Hdac3O88895 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.91□□□□□ -0.02
Hdac3O88895 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac3O88895 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac3O88895 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac3O88895 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Hdac3O88895 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.91□□□□□ -0.02
Hdac3O88895 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac3O88895 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.91□□□□□ -0.02
Hdac3O88895 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac3O88895 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac3O88895 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac3O88895 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac3O88895 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Hdac3O88895 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Hdac3O88895 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Hdac3O88895 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Hdac3O88895 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
Hdac3O88895 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Hdac3O88895 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac3O88895 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac3O88895 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac3O88895 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac3O88895 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.9□□□□□ -0.02
Hdac3O88895 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.9□□□□□ -0.02
Hdac3O88895 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac3O88895 Gm38027-201ENSMUST00000192315 235 ntBASIC14.9□□□□□ -0.02
Hdac3O88895 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.9□□□□□ -0.02
Hdac3O88895 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac3O88895 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac3O88895 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.9□□□□□ -0.02
Hdac3O88895 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac3O88895 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac3O88895 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac3O88895 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac3O88895 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac3O88895 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac3O88895 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.9□□□□□ -0.02
Hdac3O88895 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac3O88895 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Hdac3O88895 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac3O88895 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac3O88895 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Hdac3O88895 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac3O88895 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Hdac3O88895 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Hdac3O88895 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac3O88895 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac3O88895 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac3O88895 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac3O88895 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.89□□□□□ -0.03
Hdac3O88895 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Hdac3O88895 Gm17661-201ENSMUST00000170317 270 ntBASIC14.89□□□□□ -0.03
Hdac3O88895 Gm21814-202ENSMUST00000203277 873 ntBASIC14.89□□□□□ -0.03
Hdac3O88895 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.89□□□□□ -0.03
Hdac3O88895 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac3O88895 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac3O88895 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac3O88895 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Hdac3O88895 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac3O88895 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac3O88895 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac3O88895 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.89□□□□□ -0.03
Hdac3O88895 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac3O88895 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Hdac3O88895 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Hdac3O88895 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hdac3O88895 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Hdac3O88895 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hdac3O88895 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Hdac3O88895 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hdac3O88895 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hdac3O88895 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hdac3O88895 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms