Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sh2d1aO88890 Gm45774-201ENSMUST00000211992 2665 ntBASIC11.82□□□□□ -0.52
Sh2d1aO88890 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.81□□□□□ -0.52
Sh2d1aO88890 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.81□□□□□ -0.52
Sh2d1aO88890 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.81□□□□□ -0.52
Sh2d1aO88890 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.81□□□□□ -0.52
Sh2d1aO88890 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Gm26596-201ENSMUST00000180464 2655 ntBASIC11.81□□□□□ -0.52
Sh2d1aO88890 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh2d1aO88890 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2d1aO88890 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2d1aO88890 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.8□□□□□ -0.52
Sh2d1aO88890 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.8□□□□□ -0.52
Sh2d1aO88890 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2d1aO88890 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Gm10812-201ENSMUST00000099864 546 ntBASIC11.8□□□□□ -0.52
Sh2d1aO88890 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2d1aO88890 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh2d1aO88890 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.79□□□□□ -0.52
Sh2d1aO88890 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Gm22240-201ENSMUST00000175225 82 ntBASIC11.79□□□□□ -0.52
Sh2d1aO88890 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.79□□□□□ -0.52
Sh2d1aO88890 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Tfap2a-209ENSMUST00000225180 1828 ntBASIC11.79□□□□□ -0.52
Sh2d1aO88890 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh2d1aO88890 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sh2d1aO88890 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms