Protein–RNA interactions for Protein: O88888

Apba3, Amyloid-beta A4 precursor protein-binding family A member 3, mousemouse

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apba3O88888 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Apba3O88888 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apba3O88888 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apba3O88888 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apba3O88888 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apba3O88888 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.22■□□□□ 0.51
Apba3O88888 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apba3O88888 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Apba3O88888 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apba3O88888 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apba3O88888 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apba3O88888 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apba3O88888 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apba3O88888 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apba3O88888 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Apba3O88888 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apba3O88888 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Apba3O88888 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Apba3O88888 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Apba3O88888 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apba3O88888 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.21■□□□□ 0.51
Apba3O88888 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apba3O88888 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apba3O88888 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apba3O88888 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Apba3O88888 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.21■□□□□ 0.51
Apba3O88888 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.21■□□□□ 0.51
Apba3O88888 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.21■□□□□ 0.51
Apba3O88888 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apba3O88888 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.21■□□□□ 0.51
Apba3O88888 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Apba3O88888 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apba3O88888 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.21■□□□□ 0.51
Apba3O88888 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apba3O88888 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apba3O88888 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Apba3O88888 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Apba3O88888 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Apba3O88888 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Apba3O88888 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apba3O88888 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Apba3O88888 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apba3O88888 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apba3O88888 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.2■□□□□ 0.5
Apba3O88888 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apba3O88888 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.2■□□□□ 0.5
Apba3O88888 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.2■□□□□ 0.5
Apba3O88888 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apba3O88888 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.2■□□□□ 0.5
Apba3O88888 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Apba3O88888 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Apba3O88888 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apba3O88888 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Apba3O88888 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Apba3O88888 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apba3O88888 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Apba3O88888 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apba3O88888 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Apba3O88888 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.2■□□□□ 0.5
Apba3O88888 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Apba3O88888 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Apba3O88888 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.19■□□□□ 0.5
Apba3O88888 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apba3O88888 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.19■□□□□ 0.5
Apba3O88888 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Apba3O88888 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Apba3O88888 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Apba3O88888 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Apba3O88888 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.19■□□□□ 0.5
Apba3O88888 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Apba3O88888 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.19■□□□□ 0.5
Apba3O88888 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Apba3O88888 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.19■□□□□ 0.5
Apba3O88888 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apba3O88888 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apba3O88888 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Apba3O88888 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Apba3O88888 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apba3O88888 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Apba3O88888 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Apba3O88888 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Apba3O88888 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Apba3O88888 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Apba3O88888 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.18■□□□□ 0.5
Apba3O88888 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Apba3O88888 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Apba3O88888 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.18■□□□□ 0.5
Apba3O88888 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.18■□□□□ 0.5
Apba3O88888 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Apba3O88888 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Apba3O88888 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Apba3O88888 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Apba3O88888 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Apba3O88888 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Apba3O88888 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Apba3O88888 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Apba3O88888 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Apba3O88888 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.17■□□□□ 0.5
Apba3O88888 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Apba3O88888 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms