Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.17■□□□□ 0.5
Slc6a20bO88575 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Slc6a20bO88575 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.17■□□□□ 0.5
Slc6a20bO88575 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Slc6a20bO88575 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Gm13036-201ENSMUST00000117799 748 ntBASIC18.16■□□□□ 0.5
Slc6a20bO88575 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a20bO88575 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Gm6550-201ENSMUST00000187574 993 ntBASIC18.16■□□□□ 0.5
Slc6a20bO88575 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Slc6a20bO88575 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.15■□□□□ 0.5
Slc6a20bO88575 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.15■□□□□ 0.5
Slc6a20bO88575 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a20bO88575 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.15■□□□□ 0.5
Slc6a20bO88575 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a20bO88575 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Slc6a20bO88575 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Slc6a20bO88575 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Slc6a20bO88575 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.14■□□□□ 0.49
Slc6a20bO88575 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Gm25911-201ENSMUST00000157621 56 ntBASIC18.13■□□□□ 0.49
Slc6a20bO88575 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.13■□□□□ 0.49
Slc6a20bO88575 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.13■□□□□ 0.49
Slc6a20bO88575 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Slc6a20bO88575 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Slc6a20bO88575 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms