Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.47■□□□□ 0.07
Tnfrsf17O88472 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.47■□□□□ 0.07
Tnfrsf17O88472 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Mir8112-201ENSMUST00000184382 131 ntBASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf17O88472 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Gm14701-201ENSMUST00000117156 348 ntBASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Mir3113-201ENSMUST00000175478 76 ntBASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.46■□□□□ 0.07
Tnfrsf17O88472 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tnfrsf17O88472 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Tnfrsf17O88472 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Tnfrsf17O88472 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.45■□□□□ 0.06
Tnfrsf17O88472 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Gm44430-201ENSMUST00000203376 995 ntBASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.45■□□□□ 0.06
Tnfrsf17O88472 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tnfrsf17O88472 Golph3-205ENSMUST00000228671 2842 ntBASIC15.44■□□□□ 0.06
Tnfrsf17O88472 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Tnfrsf17O88472 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tnfrsf17O88472 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tnfrsf17O88472 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tnfrsf17O88472 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tnfrsf17O88472 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tnfrsf17O88472 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tnfrsf17O88472 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.44■□□□□ 0.06
Tnfrsf17O88472 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.44■□□□□ 0.06
Tnfrsf17O88472 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tnfrsf17O88472 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tnfrsf17O88472 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Tnfrsf17O88472 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tnfrsf17O88472 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tnfrsf17O88472 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tnfrsf17O88472 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Tnfrsf17O88472 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tnfrsf17O88472 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tnfrsf17O88472 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms