Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nid2O88322 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.68■■□□□ 1.06
Nid2O88322 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nid2O88322 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Nid2O88322 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nid2O88322 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nid2O88322 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nid2O88322 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nid2O88322 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nid2O88322 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nid2O88322 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Nid2O88322 Gm7222-201ENSMUST00000117512 906 ntBASIC21.67■■□□□ 1.06
Nid2O88322 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nid2O88322 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nid2O88322 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nid2O88322 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nid2O88322 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC21.67■■□□□ 1.06
Nid2O88322 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.66■■□□□ 1.06
Nid2O88322 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nid2O88322 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nid2O88322 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC21.66■■□□□ 1.06
Nid2O88322 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC21.66■■□□□ 1.06
Nid2O88322 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC21.66■■□□□ 1.06
Nid2O88322 AC090659.1-201ENSMUST00000224334 768 ntBASIC21.66■■□□□ 1.06
Nid2O88322 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nid2O88322 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nid2O88322 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nid2O88322 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nid2O88322 Slc35b2-202ENSMUST00000223987 1766 ntBASIC21.66■■□□□ 1.06
Nid2O88322 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nid2O88322 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC21.66■■□□□ 1.06
Nid2O88322 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nid2O88322 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Nid2O88322 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Nid2O88322 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nid2O88322 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nid2O88322 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nid2O88322 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nid2O88322 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Nid2O88322 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nid2O88322 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nid2O88322 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Nid2O88322 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC21.64■■□□□ 1.06
Nid2O88322 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nid2O88322 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC21.64■■□□□ 1.06
Nid2O88322 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.06
Nid2O88322 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Nid2O88322 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC21.64■■□□□ 1.05
Nid2O88322 Gm5837-201ENSMUST00000191844 1369 ntBASIC21.64■■□□□ 1.05
Nid2O88322 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
Nid2O88322 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Nid2O88322 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nid2O88322 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nid2O88322 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nid2O88322 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC21.63■■□□□ 1.05
Nid2O88322 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC21.63■■□□□ 1.05
Nid2O88322 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nid2O88322 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nid2O88322 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nid2O88322 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nid2O88322 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nid2O88322 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nid2O88322 Gm3928-201ENSMUST00000121141 1307 ntBASIC21.63■■□□□ 1.05
Nid2O88322 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.63■■□□□ 1.05
Nid2O88322 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Nid2O88322 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.63■■□□□ 1.05
Nid2O88322 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nid2O88322 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC21.63■■□□□ 1.05
Nid2O88322 Gm25406-201ENSMUST00000157599 105 ntBASIC21.63■■□□□ 1.05
Nid2O88322 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
Nid2O88322 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC21.63■■□□□ 1.05
Nid2O88322 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nid2O88322 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC21.62■■□□□ 1.05
Nid2O88322 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nid2O88322 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Nid2O88322 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Nid2O88322 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nid2O88322 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nid2O88322 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Nid2O88322 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nid2O88322 Gm7063-201ENSMUST00000186840 981 ntBASIC21.62■■□□□ 1.05
Nid2O88322 Gm9172-201ENSMUST00000212092 954 ntBASIC21.62■■□□□ 1.05
Nid2O88322 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nid2O88322 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nid2O88322 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nid2O88322 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Nid2O88322 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nid2O88322 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC21.61■■□□□ 1.05
Nid2O88322 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.61■■□□□ 1.05
Nid2O88322 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nid2O88322 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nid2O88322 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nid2O88322 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nid2O88322 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nid2O88322 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nid2O88322 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nid2O88322 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nid2O88322 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nid2O88322 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Nid2O88322 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms