Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cfdp1O88271 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cfdp1O88271 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cfdp1O88271 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfdp1O88271 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20.78■□□□□ 0.92
Cfdp1O88271 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfdp1O88271 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cfdp1O88271 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfdp1O88271 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cfdp1O88271 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.78■□□□□ 0.92
Cfdp1O88271 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfdp1O88271 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfdp1O88271 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.78■□□□□ 0.92
Cfdp1O88271 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.78■□□□□ 0.92
Cfdp1O88271 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cfdp1O88271 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cfdp1O88271 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cfdp1O88271 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cfdp1O88271 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cfdp1O88271 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cfdp1O88271 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.77■□□□□ 0.92
Cfdp1O88271 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cfdp1O88271 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cfdp1O88271 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cfdp1O88271 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cfdp1O88271 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfdp1O88271 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfdp1O88271 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfdp1O88271 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfdp1O88271 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cfdp1O88271 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cfdp1O88271 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfdp1O88271 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfdp1O88271 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfdp1O88271 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cfdp1O88271 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfdp1O88271 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfdp1O88271 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Cfdp1O88271 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cfdp1O88271 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cfdp1O88271 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cfdp1O88271 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cfdp1O88271 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cfdp1O88271 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cfdp1O88271 Gm27742-201ENSMUST00000184667 60 ntBASIC20.75■□□□□ 0.91
Cfdp1O88271 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cfdp1O88271 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cfdp1O88271 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.75■□□□□ 0.91
Cfdp1O88271 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cfdp1O88271 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.75■□□□□ 0.91
Cfdp1O88271 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cfdp1O88271 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cfdp1O88271 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfdp1O88271 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfdp1O88271 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Cfdp1O88271 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.74■□□□□ 0.91
Cfdp1O88271 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.74■□□□□ 0.91
Cfdp1O88271 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cfdp1O88271 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfdp1O88271 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfdp1O88271 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cfdp1O88271 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfdp1O88271 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.74■□□□□ 0.91
Cfdp1O88271 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cfdp1O88271 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfdp1O88271 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cfdp1O88271 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cfdp1O88271 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cfdp1O88271 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfdp1O88271 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cfdp1O88271 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfdp1O88271 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Cfdp1O88271 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfdp1O88271 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.73■□□□□ 0.91
Cfdp1O88271 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cfdp1O88271 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.73■□□□□ 0.91
Cfdp1O88271 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfdp1O88271 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cfdp1O88271 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Cfdp1O88271 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfdp1O88271 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cfdp1O88271 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfdp1O88271 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Cfdp1O88271 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cfdp1O88271 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfdp1O88271 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.72■□□□□ 0.91
Cfdp1O88271 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfdp1O88271 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfdp1O88271 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cfdp1O88271 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.72■□□□□ 0.91
Cfdp1O88271 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfdp1O88271 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfdp1O88271 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cfdp1O88271 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfdp1O88271 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cfdp1O88271 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfdp1O88271 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfdp1O88271 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cfdp1O88271 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cfdp1O88271 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms