Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr1O70481 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC21.59■■□□□ 1.05
Ubr1O70481 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr1O70481 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
Ubr1O70481 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.59■■□□□ 1.05
Ubr1O70481 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Ubr1O70481 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr1O70481 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr1O70481 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr1O70481 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Ubr1O70481 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr1O70481 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC21.59■■□□□ 1.05
Ubr1O70481 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr1O70481 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ubr1O70481 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr1O70481 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ubr1O70481 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ubr1O70481 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ubr1O70481 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ubr1O70481 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ubr1O70481 Gm18856-201ENSMUST00000178096 1374 ntBASIC21.58■■□□□ 1.05
Ubr1O70481 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC21.58■■□□□ 1.05
Ubr1O70481 Mir6404-201ENSMUST00000183699 94 ntBASIC21.58■■□□□ 1.04
Ubr1O70481 Psmb5-202ENSMUST00000227257 622 ntBASIC21.58■■□□□ 1.04
Ubr1O70481 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC21.58■■□□□ 1.04
Ubr1O70481 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ubr1O70481 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ubr1O70481 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ubr1O70481 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC21.58■■□□□ 1.04
Ubr1O70481 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ubr1O70481 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr1O70481 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ubr1O70481 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Ubr1O70481 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr1O70481 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.57■■□□□ 1.04
Ubr1O70481 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr1O70481 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC21.57■■□□□ 1.04
Ubr1O70481 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr1O70481 Gm42670-201ENSMUST00000201816 1292 ntBASIC21.57■■□□□ 1.04
Ubr1O70481 Gm9172-201ENSMUST00000212092 954 ntBASIC21.57■■□□□ 1.04
Ubr1O70481 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr1O70481 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr1O70481 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr1O70481 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr1O70481 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr1O70481 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr1O70481 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr1O70481 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr1O70481 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.57■■□□□ 1.04
Ubr1O70481 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr1O70481 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr1O70481 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC21.56■■□□□ 1.04
Ubr1O70481 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr1O70481 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Ubr1O70481 Gm6089-201ENSMUST00000197666 938 ntBASIC21.56■■□□□ 1.04
Ubr1O70481 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC21.56■■□□□ 1.04
Ubr1O70481 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC21.56■■□□□ 1.04
Ubr1O70481 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Ubr1O70481 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr1O70481 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr1O70481 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr1O70481 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr1O70481 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr1O70481 AC154527.4-201ENSMUST00000224364 1667 ntBASIC21.56■■□□□ 1.04
Ubr1O70481 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr1O70481 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr1O70481 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Ubr1O70481 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC21.56■■□□□ 1.04
Ubr1O70481 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr1O70481 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr1O70481 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr1O70481 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr1O70481 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.55■■□□□ 1.04
Ubr1O70481 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC21.55■■□□□ 1.04
Ubr1O70481 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ubr1O70481 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC21.55■■□□□ 1.04
Ubr1O70481 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ubr1O70481 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ubr1O70481 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ubr1O70481 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr1O70481 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr1O70481 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr1O70481 Gm37935-201ENSMUST00000192012 982 ntBASIC21.54■■□□□ 1.04
Ubr1O70481 AC084391.1-201ENSMUST00000200651 141 ntBASIC21.54■■□□□ 1.04
Ubr1O70481 AC154757.1-201ENSMUST00000228289 336 ntBASIC21.54■■□□□ 1.04
Ubr1O70481 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr1O70481 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr1O70481 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr1O70481 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr1O70481 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ubr1O70481 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr1O70481 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.54■■□□□ 1.04
Ubr1O70481 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr1O70481 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ubr1O70481 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr1O70481 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ubr1O70481 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr1O70481 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr1O70481 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr1O70481 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms