Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rdh5O55240 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh5O55240 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh5O55240 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh5O55240 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh5O55240 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh5O55240 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rdh5O55240 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh5O55240 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rdh5O55240 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.8■□□□□ 0.12
Rdh5O55240 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh5O55240 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Rdh5O55240 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.8■□□□□ 0.12
Rdh5O55240 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh5O55240 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh5O55240 Gm2274-201ENSMUST00000184539 609 ntBASIC15.8■□□□□ 0.12
Rdh5O55240 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rdh5O55240 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh5O55240 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh5O55240 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh5O55240 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh5O55240 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh5O55240 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh5O55240 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rdh5O55240 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rdh5O55240 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh5O55240 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh5O55240 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh5O55240 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh5O55240 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh5O55240 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh5O55240 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh5O55240 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh5O55240 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh5O55240 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
Rdh5O55240 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.79■□□□□ 0.12
Rdh5O55240 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh5O55240 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.79■□□□□ 0.12
Rdh5O55240 Gm7370-201ENSMUST00000219471 767 ntBASIC15.79■□□□□ 0.12
Rdh5O55240 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh5O55240 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rdh5O55240 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh5O55240 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.79■□□□□ 0.12
Rdh5O55240 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.79■□□□□ 0.12
Rdh5O55240 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh5O55240 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh5O55240 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh5O55240 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rdh5O55240 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh5O55240 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh5O55240 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rdh5O55240 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh5O55240 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh5O55240 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh5O55240 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh5O55240 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rdh5O55240 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh5O55240 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh5O55240 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh5O55240 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.78■□□□□ 0.12
Rdh5O55240 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh5O55240 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh5O55240 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh5O55240 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rdh5O55240 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.78■□□□□ 0.12
Rdh5O55240 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh5O55240 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh5O55240 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.77■□□□□ 0.12
Rdh5O55240 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Rdh5O55240 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh5O55240 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.77■□□□□ 0.12
Rdh5O55240 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh5O55240 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh5O55240 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.77■□□□□ 0.12
Rdh5O55240 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh5O55240 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rdh5O55240 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rdh5O55240 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.77■□□□□ 0.11
Rdh5O55240 Haglr-201ENSMUST00000100000 2085 ntBASIC15.77■□□□□ 0.11
Rdh5O55240 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.77■□□□□ 0.11
Rdh5O55240 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rdh5O55240 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rdh5O55240 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rdh5O55240 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh5O55240 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh5O55240 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh5O55240 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Rdh5O55240 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh5O55240 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh5O55240 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rdh5O55240 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rdh5O55240 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh5O55240 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh5O55240 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rdh5O55240 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rdh5O55240 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.76■□□□□ 0.11
Rdh5O55240 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rdh5O55240 Gm16061-201ENSMUST00000122167 857 ntBASIC15.76■□□□□ 0.11
Rdh5O55240 Gm7889-201ENSMUST00000185591 958 ntBASIC15.76■□□□□ 0.11
Rdh5O55240 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms