Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pja1O55176 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pja1O55176 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.63■□□□□ 0.41
Pja1O55176 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pja1O55176 Gm12085-201ENSMUST00000119263 940 ntBASIC17.63■□□□□ 0.41
Pja1O55176 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.63■□□□□ 0.41
Pja1O55176 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pja1O55176 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.63■□□□□ 0.41
Pja1O55176 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pja1O55176 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pja1O55176 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pja1O55176 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.62■□□□□ 0.41
Pja1O55176 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pja1O55176 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pja1O55176 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pja1O55176 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pja1O55176 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pja1O55176 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pja1O55176 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pja1O55176 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.61■□□□□ 0.41
Pja1O55176 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pja1O55176 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pja1O55176 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pja1O55176 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pja1O55176 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pja1O55176 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pja1O55176 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pja1O55176 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pja1O55176 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pja1O55176 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pja1O55176 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pja1O55176 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pja1O55176 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pja1O55176 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pja1O55176 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pja1O55176 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pja1O55176 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pja1O55176 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Pja1O55176 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Pja1O55176 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pja1O55176 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pja1O55176 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pja1O55176 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pja1O55176 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pja1O55176 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.6■□□□□ 0.41
Pja1O55176 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pja1O55176 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pja1O55176 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.6■□□□□ 0.41
Pja1O55176 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.6■□□□□ 0.41
Pja1O55176 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pja1O55176 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pja1O55176 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pja1O55176 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pja1O55176 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pja1O55176 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pja1O55176 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pja1O55176 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pja1O55176 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pja1O55176 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Pja1O55176 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.59■□□□□ 0.41
Pja1O55176 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.59■□□□□ 0.41
Pja1O55176 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pja1O55176 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pja1O55176 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pja1O55176 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pja1O55176 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pja1O55176 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms