Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.43□□□□□ -0.42
Rpl35aO55142 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rpl35aO55142 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Rpl35aO55142 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.43□□□□□ -0.42
Rpl35aO55142 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Rpl35aO55142 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rpl35aO55142 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.43□□□□□ -0.42
Rpl35aO55142 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rpl35aO55142 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Rpl35aO55142 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rpl35aO55142 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rpl35aO55142 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Rpl35aO55142 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rpl35aO55142 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.42□□□□□ -0.42
Rpl35aO55142 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpl35aO55142 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpl35aO55142 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpl35aO55142 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpl35aO55142 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.42□□□□□ -0.42
Rpl35aO55142 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rpl35aO55142 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rpl35aO55142 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rpl35aO55142 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rpl35aO55142 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Rpl35aO55142 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Rpl35aO55142 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.41□□□□□ -0.42
Rpl35aO55142 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rpl35aO55142 Gm18032-201ENSMUST00000222541 538 ntBASIC12.41□□□□□ -0.42
Rpl35aO55142 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rpl35aO55142 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rpl35aO55142 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rpl35aO55142 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rpl35aO55142 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rpl35aO55142 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rpl35aO55142 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.41□□□□□ -0.42
Rpl35aO55142 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.41□□□□□ -0.42
Rpl35aO55142 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rpl35aO55142 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rpl35aO55142 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rpl35aO55142 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Rpl35aO55142 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.4□□□□□ -0.42
Rpl35aO55142 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rpl35aO55142 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms