Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.84□□□□□ -0.19
SncaO55042 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SncaO55042 Gm10517-202ENSMUST00000192970 758 ntBASIC13.84□□□□□ -0.19
SncaO55042 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
SncaO55042 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SncaO55042 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SncaO55042 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SncaO55042 Gm20628-201ENSMUST00000177363 3215 ntBASIC13.83□□□□□ -0.19
SncaO55042 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.83□□□□□ -0.2
SncaO55042 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.83□□□□□ -0.2
SncaO55042 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SncaO55042 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.83□□□□□ -0.2
SncaO55042 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.83□□□□□ -0.2
SncaO55042 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.83□□□□□ -0.2
SncaO55042 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
SncaO55042 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
SncaO55042 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.83□□□□□ -0.2
SncaO55042 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SncaO55042 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SncaO55042 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.82□□□□□ -0.2
SncaO55042 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.82□□□□□ -0.2
SncaO55042 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Gm37292-201ENSMUST00000192062 758 ntBASIC13.82□□□□□ -0.2
SncaO55042 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SncaO55042 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SncaO55042 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
SncaO55042 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SncaO55042 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
SncaO55042 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.81□□□□□ -0.2
SncaO55042 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.81□□□□□ -0.2
SncaO55042 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
SncaO55042 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.81□□□□□ -0.2
SncaO55042 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.81□□□□□ -0.2
SncaO55042 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SncaO55042 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
SncaO55042 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC13.8□□□□□ -0.2
SncaO55042 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SncaO55042 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SncaO55042 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms