Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl13O55038 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cxcl13O55038 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl13O55038 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl13O55038 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl13O55038 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl13O55038 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Cxcl13O55038 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.1□□□□□ -0.15
Cxcl13O55038 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl13O55038 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl13O55038 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl13O55038 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Cxcl13O55038 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl13O55038 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl13O55038 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cxcl13O55038 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl13O55038 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl13O55038 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl13O55038 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cxcl13O55038 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cxcl13O55038 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cxcl13O55038 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl13O55038 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl13O55038 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl13O55038 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.09□□□□□ -0.15
Cxcl13O55038 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl13O55038 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.09□□□□□ -0.15
Cxcl13O55038 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl13O55038 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl13O55038 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl13O55038 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl13O55038 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.09□□□□□ -0.15
Cxcl13O55038 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl13O55038 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cxcl13O55038 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cxcl13O55038 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl13O55038 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl13O55038 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl13O55038 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl13O55038 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.09□□□□□ -0.15
Cxcl13O55038 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl13O55038 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cxcl13O55038 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cxcl13O55038 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl13O55038 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl13O55038 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.08□□□□□ -0.16
Cxcl13O55038 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl13O55038 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl13O55038 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl13O55038 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl13O55038 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.08□□□□□ -0.16
Cxcl13O55038 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cxcl13O55038 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.08□□□□□ -0.16
Cxcl13O55038 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl13O55038 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl13O55038 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl13O55038 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.08□□□□□ -0.16
Cxcl13O55038 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.08□□□□□ -0.16
Cxcl13O55038 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl13O55038 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl13O55038 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.08□□□□□ -0.16
Cxcl13O55038 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl13O55038 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cxcl13O55038 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.07□□□□□ -0.16
Cxcl13O55038 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cxcl13O55038 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Cxcl13O55038 Gm24589-201ENSMUST00000116692 94 ntBASIC14.07□□□□□ -0.16
Cxcl13O55038 Gm10052-201ENSMUST00000168019 960 ntBASIC14.07□□□□□ -0.16
Cxcl13O55038 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.07□□□□□ -0.16
Cxcl13O55038 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cxcl13O55038 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 Gm7729-201ENSMUST00000050143 801 ntBASIC14.07□□□□□ -0.16
Cxcl13O55038 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.07□□□□□ -0.16
Cxcl13O55038 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cxcl13O55038 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cxcl13O55038 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.07□□□□□ -0.16
Cxcl13O55038 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.07□□□□□ -0.16
Cxcl13O55038 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cxcl13O55038 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms