Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rnf13O54965 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf13O54965 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf13O54965 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf13O54965 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf13O54965 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Rnf13O54965 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf13O54965 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf13O54965 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.15■□□□□ 0.02
Rnf13O54965 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.15■□□□□ 0.02
Rnf13O54965 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rnf13O54965 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Rnf13O54965 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf13O54965 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf13O54965 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf13O54965 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf13O54965 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rnf13O54965 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf13O54965 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.15■□□□□ 0.02
Rnf13O54965 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
Rnf13O54965 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf13O54965 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Rnf13O54965 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
Rnf13O54965 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf13O54965 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
Rnf13O54965 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rnf13O54965 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Rnf13O54965 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Gm24841-201ENSMUST00000158676 357 ntBASIC15.14■□□□□ 0.01
Rnf13O54965 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.14■□□□□ 0.01
Rnf13O54965 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rnf13O54965 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rnf13O54965 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Rnf13O54965 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf13O54965 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf13O54965 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf13O54965 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Rnf13O54965 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.13■□□□□ 0.01
Rnf13O54965 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf13O54965 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf13O54965 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf13O54965 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf13O54965 Gm27275-201ENSMUST00000184318 272 ntBASIC15.13■□□□□ 0.01
Rnf13O54965 Gm37292-201ENSMUST00000192062 758 ntBASIC15.13■□□□□ 0.01
Rnf13O54965 Gm10517-202ENSMUST00000192970 758 ntBASIC15.13■□□□□ 0.01
Rnf13O54965 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf13O54965 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf13O54965 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf13O54965 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf13O54965 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rnf13O54965 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf13O54965 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.13■□□□□ 0.01
Rnf13O54965 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf13O54965 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf13O54965 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnf13O54965 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Rnf13O54965 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.12■□□□□ 0.01
Rnf13O54965 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.12■□□□□ 0.01
Rnf13O54965 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rnf13O54965 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.12■□□□□ 0.01
Rnf13O54965 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.12■□□□□ 0.01
Rnf13O54965 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Rnf13O54965 Gm12382-201ENSMUST00000122005 922 ntBASIC15.12■□□□□ 0.01
Rnf13O54965 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.12■□□□□ 0.01
Rnf13O54965 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Rnf13O54965 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms