Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Dkk1O54908 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Dkk1O54908 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.67□□□□□ -0.06
Dkk1O54908 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Dkk1O54908 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Dkk1O54908 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Dkk1O54908 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Dkk1O54908 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Dkk1O54908 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC14.67□□□□□ -0.06
Dkk1O54908 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC14.67□□□□□ -0.06
Dkk1O54908 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.67□□□□□ -0.06
Dkk1O54908 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.67□□□□□ -0.06
Dkk1O54908 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Dkk1O54908 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.67□□□□□ -0.06
Dkk1O54908 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Dkk1O54908 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC14.67□□□□□ -0.06
Dkk1O54908 Gm28439-201ENSMUST00000187714 876 ntBASIC14.67□□□□□ -0.06
Dkk1O54908 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Dkk1O54908 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Dkk1O54908 Gm18026-201ENSMUST00000222789 727 ntBASIC14.67□□□□□ -0.06
Dkk1O54908 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Dkk1O54908 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Dkk1O54908 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Dkk1O54908 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Dkk1O54908 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Dkk1O54908 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Dkk1O54908 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Dkk1O54908 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Dkk1O54908 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.67□□□□□ -0.06
Dkk1O54908 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Dkk1O54908 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.67□□□□□ -0.06
Dkk1O54908 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Dkk1O54908 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Dkk1O54908 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Dkk1O54908 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.66□□□□□ -0.06
Dkk1O54908 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Dkk1O54908 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Dkk1O54908 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Dkk1O54908 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Dkk1O54908 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Dkk1O54908 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.66□□□□□ -0.06
Dkk1O54908 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Dkk1O54908 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.66□□□□□ -0.06
Dkk1O54908 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Dkk1O54908 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC14.66□□□□□ -0.06
Dkk1O54908 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Dkk1O54908 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Dkk1O54908 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Dkk1O54908 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Dkk1O54908 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Dkk1O54908 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Dkk1O54908 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Dkk1O54908 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Dkk1O54908 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Dkk1O54908 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Dkk1O54908 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Dkk1O54908 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Dkk1O54908 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Dkk1O54908 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Dkk1O54908 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Dkk1O54908 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Dkk1O54908 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Dkk1O54908 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Dkk1O54908 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Dkk1O54908 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Dkk1O54908 Mir670hg-205ENSMUST00000210851 1148 ntTSL 5 BASIC14.65□□□□□ -0.06
Dkk1O54908 AC153899.1-201ENSMUST00000214092 1117 ntBASIC14.65□□□□□ -0.06
Dkk1O54908 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Dkk1O54908 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Dkk1O54908 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Dkk1O54908 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Dkk1O54908 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Dkk1O54908 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.65□□□□□ -0.06
Dkk1O54908 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.65□□□□□ -0.06
Dkk1O54908 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Dkk1O54908 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Dkk1O54908 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.65□□□□□ -0.06
Dkk1O54908 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Dkk1O54908 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Dkk1O54908 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Dkk1O54908 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.64□□□□□ -0.07
Dkk1O54908 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Dkk1O54908 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Dkk1O54908 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.64□□□□□ -0.07
Dkk1O54908 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Dkk1O54908 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Dkk1O54908 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Dkk1O54908 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Dkk1O54908 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Dkk1O54908 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Dkk1O54908 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.64□□□□□ -0.07
Dkk1O54908 Gm8988-201ENSMUST00000155015 1240 ntBASIC14.64□□□□□ -0.07
Dkk1O54908 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.64□□□□□ -0.07
Dkk1O54908 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Dkk1O54908 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Dkk1O54908 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms