Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.62■□□□□ 0.09
Abca4O35600 Gm8655-201ENSMUST00000221159 852 ntBASIC15.62■□□□□ 0.09
Abca4O35600 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.62■□□□□ 0.09
Abca4O35600 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Abca4O35600 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Abca4O35600 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abca4O35600 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Abca4O35600 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abca4O35600 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abca4O35600 Idnk-204ENSMUST00000226010 1898 ntBASIC15.62■□□□□ 0.09
Abca4O35600 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abca4O35600 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Abca4O35600 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Abca4O35600 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Abca4O35600 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Abca4O35600 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Abca4O35600 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Abca4O35600 Gm18187-201ENSMUST00000196476 984 ntBASIC15.62■□□□□ 0.09
Abca4O35600 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.62■□□□□ 0.09
Abca4O35600 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
Abca4O35600 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Abca4O35600 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Abca4O35600 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Abca4O35600 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Abca4O35600 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.61■□□□□ 0.09
Abca4O35600 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.61■□□□□ 0.09
Abca4O35600 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.61■□□□□ 0.09
Abca4O35600 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abca4O35600 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abca4O35600 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abca4O35600 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abca4O35600 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.61■□□□□ 0.09
Abca4O35600 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abca4O35600 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abca4O35600 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Abca4O35600 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abca4O35600 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Abca4O35600 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.61■□□□□ 0.09
Abca4O35600 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.61■□□□□ 0.09
Abca4O35600 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Abca4O35600 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC15.6■□□□□ 0.09
Abca4O35600 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Abca4O35600 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.6■□□□□ 0.09
Abca4O35600 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Abca4O35600 Gm9172-201ENSMUST00000212092 954 ntBASIC15.6■□□□□ 0.09
Abca4O35600 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.6■□□□□ 0.09
Abca4O35600 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Abca4O35600 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Abca4O35600 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Abca4O35600 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Abca4O35600 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Abca4O35600 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Abca4O35600 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.6■□□□□ 0.09
Abca4O35600 Mir6990-201ENSMUST00000183724 91 ntBASIC15.6■□□□□ 0.09
Abca4O35600 Gm27622-201ENSMUST00000183779 60 ntBASIC15.6■□□□□ 0.09
Abca4O35600 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.6■□□□□ 0.09
Abca4O35600 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Abca4O35600 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abca4O35600 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abca4O35600 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abca4O35600 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abca4O35600 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Abca4O35600 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.59■□□□□ 0.09
Abca4O35600 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.59■□□□□ 0.09
Abca4O35600 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.59■□□□□ 0.09
Abca4O35600 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abca4O35600 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abca4O35600 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abca4O35600 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abca4O35600 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Abca4O35600 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abca4O35600 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.59■□□□□ 0.09
Abca4O35600 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abca4O35600 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abca4O35600 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abca4O35600 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Abca4O35600 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abca4O35600 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.59■□□□□ 0.09
Abca4O35600 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Abca4O35600 Gm17968-201ENSMUST00000194902 784 ntBASIC15.59■□□□□ 0.09
Abca4O35600 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Abca4O35600 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
Abca4O35600 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Abca4O35600 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Abca4O35600 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Abca4O35600 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Abca4O35600 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abca4O35600 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.58■□□□□ 0.08
Abca4O35600 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abca4O35600 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Abca4O35600 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abca4O35600 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.58■□□□□ 0.08
Abca4O35600 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abca4O35600 Gm43474-201ENSMUST00000196415 774 ntBASIC15.58■□□□□ 0.08
Abca4O35600 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.58■□□□□ 0.08
Abca4O35600 Gm45747-201ENSMUST00000212203 999 ntBASIC15.58■□□□□ 0.08
Abca4O35600 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abca4O35600 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Abca4O35600 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abca4O35600 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms