Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Clcn6O35454 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn6O35454 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn6O35454 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn6O35454 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn6O35454 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn6O35454 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clcn6O35454 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn6O35454 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn6O35454 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn6O35454 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn6O35454 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.83■□□□□ 0.45
Clcn6O35454 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn6O35454 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn6O35454 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn6O35454 Flg-201ENSMUST00000050758 1488 ntBASIC17.83■□□□□ 0.45
Clcn6O35454 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn6O35454 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Clcn6O35454 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Clcn6O35454 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Clcn6O35454 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn6O35454 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn6O35454 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.83■□□□□ 0.44
Clcn6O35454 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.83■□□□□ 0.44
Clcn6O35454 Gm14862-201ENSMUST00000115553 870 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn6O35454 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC17.83■□□□□ 0.44
Clcn6O35454 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Clcn6O35454 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn6O35454 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Clcn6O35454 Gm45610-201ENSMUST00000209227 784 ntBASIC17.83■□□□□ 0.44
Clcn6O35454 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn6O35454 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.83■□□□□ 0.44
Clcn6O35454 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn6O35454 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn6O35454 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn6O35454 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn6O35454 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Clcn6O35454 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clcn6O35454 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Clcn6O35454 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn6O35454 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn6O35454 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Clcn6O35454 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn6O35454 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn6O35454 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Clcn6O35454 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Clcn6O35454 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Clcn6O35454 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Clcn6O35454 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn6O35454 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn6O35454 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Clcn6O35454 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn6O35454 Gm13216-201ENSMUST00000117145 591 ntBASIC17.82■□□□□ 0.44
Clcn6O35454 Gm12656-201ENSMUST00000118149 577 ntBASIC17.82■□□□□ 0.44
Clcn6O35454 Gm11927-201ENSMUST00000118472 759 ntBASIC17.82■□□□□ 0.44
Clcn6O35454 Gm1866-201ENSMUST00000120701 477 ntBASIC17.82■□□□□ 0.44
Clcn6O35454 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.82■□□□□ 0.44
Clcn6O35454 Gm14905-201ENSMUST00000122351 639 ntBASIC17.82■□□□□ 0.44
Clcn6O35454 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.82■□□□□ 0.44
Clcn6O35454 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC17.82■□□□□ 0.44
Clcn6O35454 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.82■□□□□ 0.44
Clcn6O35454 Gm2559-201ENSMUST00000201323 363 ntBASIC17.82■□□□□ 0.44
Clcn6O35454 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.82■□□□□ 0.44
Clcn6O35454 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn6O35454 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Clcn6O35454 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn6O35454 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn6O35454 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn6O35454 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn6O35454 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn6O35454 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn6O35454 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn6O35454 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clcn6O35454 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn6O35454 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Clcn6O35454 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn6O35454 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn6O35454 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn6O35454 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.81■□□□□ 0.44
Clcn6O35454 Gm12896-201ENSMUST00000118430 226 ntBASIC17.81■□□□□ 0.44
Clcn6O35454 Gm13333-201ENSMUST00000119424 781 ntBASIC17.81■□□□□ 0.44
Clcn6O35454 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn6O35454 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Clcn6O35454 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn6O35454 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn6O35454 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn6O35454 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn6O35454 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn6O35454 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.81■□□□□ 0.44
Clcn6O35454 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn6O35454 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Clcn6O35454 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clcn6O35454 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Clcn6O35454 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Clcn6O35454 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clcn6O35454 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms