Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Efnb3O35393 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Efnb3O35393 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Efnb3O35393 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.21□□□□□ -0.29
Efnb3O35393 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.21□□□□□ -0.29
Efnb3O35393 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.21□□□□□ -0.29
Efnb3O35393 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Efnb3O35393 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.21□□□□□ -0.29
Efnb3O35393 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.21□□□□□ -0.29
Efnb3O35393 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Efnb3O35393 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Efnb3O35393 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Efnb3O35393 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Efnb3O35393 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Efnb3O35393 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Gm15375-201ENSMUST00000119510 849 ntBASIC13.2□□□□□ -0.3
Efnb3O35393 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Efnb3O35393 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.2□□□□□ -0.3
Efnb3O35393 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Efnb3O35393 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Efnb3O35393 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Efnb3O35393 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Efnb3O35393 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.19□□□□□ -0.3
Efnb3O35393 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Efnb3O35393 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Efnb3O35393 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.19□□□□□ -0.3
Efnb3O35393 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Efnb3O35393 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.19□□□□□ -0.3
Efnb3O35393 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.19□□□□□ -0.3
Efnb3O35393 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.19□□□□□ -0.3
Efnb3O35393 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.19□□□□□ -0.3
Efnb3O35393 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.19□□□□□ -0.3
Efnb3O35393 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.19□□□□□ -0.3
Efnb3O35393 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Efnb3O35393 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.19□□□□□ -0.3
Efnb3O35393 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Efnb3O35393 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Efnb3O35393 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Efnb3O35393 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.18□□□□□ -0.3
Efnb3O35393 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Efnb3O35393 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Efnb3O35393 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms