Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Gm5874-201ENSMUST00000096101 508 ntBASIC13.06□□□□□ -0.32
Tnfsf11O35235 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.06□□□□□ -0.32
Tnfsf11O35235 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.06□□□□□ -0.32
Tnfsf11O35235 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf11O35235 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf11O35235 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Tnfsf11O35235 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 AV356131-201ENSMUST00000206201 750 ntBASIC13.05□□□□□ -0.32
Tnfsf11O35235 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
Tnfsf11O35235 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf11O35235 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.04□□□□□ -0.32
Tnfsf11O35235 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Tnfsf11O35235 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfsf11O35235 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfsf11O35235 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.03□□□□□ -0.32
Tnfsf11O35235 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfsf11O35235 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfsf11O35235 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.03□□□□□ -0.32
Tnfsf11O35235 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfsf11O35235 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
Tnfsf11O35235 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Tnfsf11O35235 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfsf11O35235 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms