Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.9□□□□□ -0.02
Alx4O35137 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.9□□□□□ -0.02
Alx4O35137 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Alx4O35137 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Alx4O35137 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx4O35137 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx4O35137 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Alx4O35137 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Alx4O35137 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx4O35137 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx4O35137 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx4O35137 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.89□□□□□ -0.03
Alx4O35137 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Alx4O35137 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx4O35137 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx4O35137 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.89□□□□□ -0.03
Alx4O35137 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Alx4O35137 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Alx4O35137 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.89□□□□□ -0.03
Alx4O35137 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.89□□□□□ -0.03
Alx4O35137 Gm18666-201ENSMUST00000190039 958 ntBASIC14.89□□□□□ -0.03
Alx4O35137 Gm43183-201ENSMUST00000200632 547 ntBASIC14.89□□□□□ -0.03
Alx4O35137 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Alx4O35137 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx4O35137 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx4O35137 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx4O35137 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx4O35137 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx4O35137 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Alx4O35137 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Alx4O35137 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx4O35137 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx4O35137 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.88□□□□□ -0.03
Alx4O35137 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Alx4O35137 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.88□□□□□ -0.03
Alx4O35137 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx4O35137 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx4O35137 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Alx4O35137 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx4O35137 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Alx4O35137 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx4O35137 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx4O35137 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Alx4O35137 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Alx4O35137 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Alx4O35137 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx4O35137 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx4O35137 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Alx4O35137 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Alx4O35137 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.87□□□□□ -0.03
Alx4O35137 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Alx4O35137 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.87□□□□□ -0.03
Alx4O35137 Gm9731-201ENSMUST00000209480 747 ntBASIC14.87□□□□□ -0.03
Alx4O35137 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.87□□□□□ -0.03
Alx4O35137 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx4O35137 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx4O35137 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx4O35137 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx4O35137 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Alx4O35137 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.86□□□□□ -0.03
Alx4O35137 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx4O35137 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Alx4O35137 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Alx4O35137 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx4O35137 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx4O35137 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx4O35137 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Alx4O35137 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.86□□□□□ -0.03
Alx4O35137 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Alx4O35137 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx4O35137 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.85□□□□□ -0.03
Alx4O35137 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx4O35137 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.85□□□□□ -0.03
Alx4O35137 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms