Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.3■□□□□ 0.2
Atn1O35126 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atn1O35126 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.3■□□□□ 0.2
Atn1O35126 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atn1O35126 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Atn1O35126 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atn1O35126 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Atn1O35126 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atn1O35126 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atn1O35126 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atn1O35126 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Atn1O35126 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atn1O35126 Gm7638-201ENSMUST00000121348 967 ntBASIC16.29■□□□□ 0.2
Atn1O35126 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atn1O35126 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atn1O35126 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Atn1O35126 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atn1O35126 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atn1O35126 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.29■□□□□ 0.2
Atn1O35126 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Atn1O35126 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Atn1O35126 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Atn1O35126 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.28■□□□□ 0.2
Atn1O35126 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Atn1O35126 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Atn1O35126 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atn1O35126 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atn1O35126 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Atn1O35126 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.28■□□□□ 0.2
Atn1O35126 Gm38027-201ENSMUST00000192315 235 ntBASIC16.28■□□□□ 0.2
Atn1O35126 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atn1O35126 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.28■□□□□ 0.2
Atn1O35126 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Atn1O35126 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.28■□□□□ 0.2
Atn1O35126 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atn1O35126 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atn1O35126 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.28■□□□□ 0.2
Atn1O35126 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atn1O35126 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atn1O35126 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Atn1O35126 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atn1O35126 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Atn1O35126 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Atn1O35126 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Atn1O35126 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atn1O35126 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.27■□□□□ 0.19
Atn1O35126 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atn1O35126 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Atn1O35126 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.26■□□□□ 0.19
Atn1O35126 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.26■□□□□ 0.19
Atn1O35126 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.26■□□□□ 0.19
Atn1O35126 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Gm9731-201ENSMUST00000209480 747 ntBASIC16.26■□□□□ 0.19
Atn1O35126 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.26■□□□□ 0.19
Atn1O35126 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Atn1O35126 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Atn1O35126 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atn1O35126 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atn1O35126 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atn1O35126 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atn1O35126 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atn1O35126 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atn1O35126 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Atn1O35126 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.25■□□□□ 0.19
Atn1O35126 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.25■□□□□ 0.19
Atn1O35126 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Atn1O35126 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atn1O35126 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.25■□□□□ 0.19
Atn1O35126 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atn1O35126 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atn1O35126 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atn1O35126 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Atn1O35126 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atn1O35126 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Atn1O35126 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Atn1O35126 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atn1O35126 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Atn1O35126 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Atn1O35126 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
Atn1O35126 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms