Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2b3O09039 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2b3O09039 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Sh2b3O09039 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Sh2b3O09039 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2b3O09039 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2b3O09039 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2b3O09039 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.84□□□□□ -0.03
Sh2b3O09039 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sh2b3O09039 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2b3O09039 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2b3O09039 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2b3O09039 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2b3O09039 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2b3O09039 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2b3O09039 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.84□□□□□ -0.03
Sh2b3O09039 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sh2b3O09039 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2b3O09039 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Sh2b3O09039 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2b3O09039 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2b3O09039 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sh2b3O09039 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sh2b3O09039 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2b3O09039 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sh2b3O09039 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Sh2b3O09039 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sh2b3O09039 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sh2b3O09039 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Sh2b3O09039 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sh2b3O09039 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2b3O09039 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2b3O09039 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2b3O09039 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.83□□□□□ -0.04
Sh2b3O09039 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Sh2b3O09039 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2b3O09039 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2b3O09039 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2b3O09039 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Sh2b3O09039 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2b3O09039 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2b3O09039 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2b3O09039 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2b3O09039 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2b3O09039 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sh2b3O09039 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.82□□□□□ -0.04
Sh2b3O09039 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.82□□□□□ -0.04
Sh2b3O09039 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.82□□□□□ -0.04
Sh2b3O09039 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sh2b3O09039 Gm27704-201ENSMUST00000185094 107 ntBASIC14.82□□□□□ -0.04
Sh2b3O09039 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.82□□□□□ -0.04
Sh2b3O09039 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.82□□□□□ -0.04
Sh2b3O09039 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sh2b3O09039 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Sh2b3O09039 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2b3O09039 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.81□□□□□ -0.04
Sh2b3O09039 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2b3O09039 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2b3O09039 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2b3O09039 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.81□□□□□ -0.04
Sh2b3O09039 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2b3O09039 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.81□□□□□ -0.04
Sh2b3O09039 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2b3O09039 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2b3O09039 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2b3O09039 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2b3O09039 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sh2b3O09039 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Sh2b3O09039 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Sh2b3O09039 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2b3O09039 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.81□□□□□ -0.04
Sh2b3O09039 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh2b3O09039 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh2b3O09039 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms