Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1O08852 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.53□□□□□ -0.72
Pkd1O08852 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1O08852 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1O08852 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1O08852 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1O08852 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1O08852 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1O08852 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1O08852 Gm7507-201ENSMUST00000183053 1008 ntBASIC10.53□□□□□ -0.72
Pkd1O08852 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pkd1O08852 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pkd1O08852 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Pkd1O08852 Slc35b2-202ENSMUST00000223987 1766 ntBASIC10.52□□□□□ -0.72
Pkd1O08852 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Pkd1O08852 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pkd1O08852 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Pkd1O08852 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.52□□□□□ -0.73
Pkd1O08852 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pkd1O08852 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pkd1O08852 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Pkd1O08852 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pkd1O08852 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC10.52□□□□□ -0.73
Pkd1O08852 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pkd1O08852 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pkd1O08852 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pkd1O08852 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC10.52□□□□□ -0.73
Pkd1O08852 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.52□□□□□ -0.73
Pkd1O08852 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC10.52□□□□□ -0.73
Pkd1O08852 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pkd1O08852 Gm27300-201ENSMUST00000184085 97 ntBASIC10.52□□□□□ -0.73
Pkd1O08852 Gm27335-201ENSMUST00000184758 97 ntBASIC10.52□□□□□ -0.73
Pkd1O08852 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pkd1O08852 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pkd1O08852 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pkd1O08852 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pkd1O08852 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pkd1O08852 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pkd1O08852 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC10.52□□□□□ -0.73
Pkd1O08852 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pkd1O08852 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pkd1O08852 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pkd1O08852 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Pkd1O08852 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC10.51□□□□□ -0.73
Pkd1O08852 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC10.51□□□□□ -0.73
Pkd1O08852 Gm8825-201ENSMUST00000182565 998 ntBASIC10.51□□□□□ -0.73
Pkd1O08852 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC10.51□□□□□ -0.73
Pkd1O08852 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pkd1O08852 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC10.5□□□□□ -0.73
Pkd1O08852 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC10.5□□□□□ -0.73
Pkd1O08852 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC10.5□□□□□ -0.73
Pkd1O08852 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC10.5□□□□□ -0.73
Pkd1O08852 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pkd1O08852 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Gm11025-201ENSMUST00000140773 466 ntBASIC10.5□□□□□ -0.73
Pkd1O08852 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.5□□□□□ -0.73
Pkd1O08852 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pkd1O08852 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms