Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trove2O08848 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trove2O08848 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trove2O08848 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trove2O08848 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trove2O08848 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trove2O08848 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trove2O08848 Gm29257-201ENSMUST00000186115 639 ntBASIC17.14■□□□□ 0.33
Trove2O08848 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.14■□□□□ 0.33
Trove2O08848 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trove2O08848 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trove2O08848 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trove2O08848 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trove2O08848 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trove2O08848 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trove2O08848 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trove2O08848 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trove2O08848 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trove2O08848 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Trove2O08848 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Mir2861-201ENSMUST00000175539 82 ntBASIC17.13■□□□□ 0.33
Trove2O08848 Mir6349-201ENSMUST00000184059 97 ntBASIC17.13■□□□□ 0.33
Trove2O08848 Gm27275-201ENSMUST00000184318 272 ntBASIC17.13■□□□□ 0.33
Trove2O08848 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.13■□□□□ 0.33
Trove2O08848 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trove2O08848 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trove2O08848 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trove2O08848 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trove2O08848 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trove2O08848 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trove2O08848 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trove2O08848 Gm13158-201ENSMUST00000122007 736 ntBASIC17.12■□□□□ 0.33
Trove2O08848 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.12■□□□□ 0.33
Trove2O08848 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.12■□□□□ 0.33
Trove2O08848 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.12■□□□□ 0.33
Trove2O08848 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trove2O08848 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.12■□□□□ 0.33
Trove2O08848 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trove2O08848 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trove2O08848 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trove2O08848 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Trove2O08848 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trove2O08848 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trove2O08848 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Trove2O08848 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trove2O08848 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trove2O08848 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trove2O08848 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trove2O08848 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trove2O08848 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.11■□□□□ 0.33
Trove2O08848 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trove2O08848 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trove2O08848 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trove2O08848 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trove2O08848 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trove2O08848 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trove2O08848 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.11■□□□□ 0.33
Trove2O08848 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trove2O08848 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trove2O08848 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trove2O08848 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trove2O08848 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.1■□□□□ 0.33
Trove2O08848 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.1■□□□□ 0.33
Trove2O08848 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trove2O08848 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trove2O08848 Gm15375-201ENSMUST00000119510 849 ntBASIC17.1■□□□□ 0.33
Trove2O08848 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trove2O08848 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Trove2O08848 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trove2O08848 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trove2O08848 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trove2O08848 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trove2O08848 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trove2O08848 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trove2O08848 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trove2O08848 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trove2O08848 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trove2O08848 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trove2O08848 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms