Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf3O08791 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf3O08791 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf3O08791 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf3O08791 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf3O08791 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.29■□□□□ 0.36
Ebf3O08791 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf3O08791 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf3O08791 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf3O08791 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf3O08791 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf3O08791 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf3O08791 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Ebf3O08791 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf3O08791 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf3O08791 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ebf3O08791 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ebf3O08791 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ebf3O08791 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ebf3O08791 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.28■□□□□ 0.36
Ebf3O08791 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.28■□□□□ 0.36
Ebf3O08791 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ebf3O08791 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ebf3O08791 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf3O08791 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf3O08791 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf3O08791 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.27■□□□□ 0.36
Ebf3O08791 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf3O08791 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf3O08791 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ebf3O08791 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
Ebf3O08791 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Ebf3O08791 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.27■□□□□ 0.36
Ebf3O08791 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.27■□□□□ 0.36
Ebf3O08791 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Ebf3O08791 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf3O08791 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ebf3O08791 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Ebf3O08791 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Ebf3O08791 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ebf3O08791 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ebf3O08791 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ebf3O08791 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ebf3O08791 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Ebf3O08791 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Ebf3O08791 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ebf3O08791 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ebf3O08791 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf3O08791 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf3O08791 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf3O08791 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf3O08791 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf3O08791 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf3O08791 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf3O08791 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.26■□□□□ 0.35
Ebf3O08791 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf3O08791 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.26■□□□□ 0.35
Ebf3O08791 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.26■□□□□ 0.35
Ebf3O08791 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf3O08791 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf3O08791 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf3O08791 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ebf3O08791 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf3O08791 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf3O08791 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.25■□□□□ 0.35
Ebf3O08791 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf3O08791 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf3O08791 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf3O08791 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf3O08791 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ebf3O08791 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.25■□□□□ 0.35
Ebf3O08791 Gm44771-201ENSMUST00000206975 626 ntBASIC17.25■□□□□ 0.35
Ebf3O08791 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf3O08791 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf3O08791 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ebf3O08791 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ebf3O08791 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ebf3O08791 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf3O08791 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf3O08791 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf3O08791 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Ebf3O08791 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ebf3O08791 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms