Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shisa8J3QNX5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Mir5133-201ENSMUST00000174955 77 ntBASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shisa8J3QNX5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shisa8J3QNX5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Gm2559-201ENSMUST00000201323 363 ntBASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.23■□□□□ 0.03
Shisa8J3QNX5 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.23■□□□□ 0.03
Shisa8J3QNX5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Shisa8J3QNX5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa8J3QNX5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa8J3QNX5 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa8J3QNX5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa8J3QNX5 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Shisa8J3QNX5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Shisa8J3QNX5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Shisa8J3QNX5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa8J3QNX5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa8J3QNX5 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa8J3QNX5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.22■□□□□ 0.03
Shisa8J3QNX5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa8J3QNX5 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shisa8J3QNX5 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms