Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17535J3KMR8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17535J3KMR8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.7■□□□□ 0.42
Gm17535J3KMR8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17535J3KMR8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.7■□□□□ 0.42
Gm17535J3KMR8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.7■□□□□ 0.42
Gm17535J3KMR8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17535J3KMR8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17535J3KMR8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gm17535J3KMR8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17535J3KMR8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17535J3KMR8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17535J3KMR8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17535J3KMR8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Gm17535J3KMR8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Gm17535J3KMR8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Gm17535J3KMR8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Gm10052-201ENSMUST00000168019 960 ntBASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Gm44430-201ENSMUST00000203376 995 ntBASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Gm7729-201ENSMUST00000050143 801 ntBASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Gm17535J3KMR8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gm17535J3KMR8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.67■□□□□ 0.42
Gm17535J3KMR8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm17535J3KMR8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm17535J3KMR8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm17535J3KMR8 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm17535J3KMR8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Gm17535J3KMR8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm17535J3KMR8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.67■□□□□ 0.42
Gm17535J3KMR8 Gm17971-201ENSMUST00000190239 806 ntBASIC17.67■□□□□ 0.42
Gm17535J3KMR8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm17535J3KMR8 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.67■□□□□ 0.42
Gm17535J3KMR8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm17535J3KMR8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Gm17535J3KMR8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm17535J3KMR8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Gm17535J3KMR8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm17535J3KMR8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm17535J3KMR8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.67■□□□□ 0.42
Gm17535J3KMR8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm17535J3KMR8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gm17535J3KMR8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm17535J3KMR8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms