Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Gm7791-201ENSMUST00000219066 539 ntBASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Timm23-208ENSMUST00000226683 750 ntBASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdh9F8VPK8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Gm715-201ENSMUST00000117865 831 ntBASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdh9F8VPK8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh9F8VPK8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh9F8VPK8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.08■□□□□ 0.33
Pcdh9F8VPK8 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Pcdh9F8VPK8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdh9F8VPK8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh9F8VPK8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh9F8VPK8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh9F8VPK8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdh9F8VPK8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh9F8VPK8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh9F8VPK8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh9F8VPK8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdh9F8VPK8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh9F8VPK8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh9F8VPK8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdh9F8VPK8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdh9F8VPK8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.08■□□□□ 0.32
Pcdh9F8VPK8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Dancr-204ENSMUST00000132389 2347 ntBASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdh9F8VPK8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdh9F8VPK8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms