Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc188F6WEU2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc188F6WEU2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc188F6WEU2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc188F6WEU2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc188F6WEU2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc188F6WEU2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc188F6WEU2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc188F6WEU2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc188F6WEU2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ccdc188F6WEU2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc188F6WEU2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc188F6WEU2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ccdc188F6WEU2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc188F6WEU2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.83■□□□□ 0.28
Ccdc188F6WEU2 Gm27437-201ENSMUST00000183429 107 ntBASIC16.83■□□□□ 0.28
Ccdc188F6WEU2 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.83■□□□□ 0.28
Ccdc188F6WEU2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ccdc188F6WEU2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc188F6WEU2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc188F6WEU2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc188F6WEU2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Ccdc188F6WEU2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc188F6WEU2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ccdc188F6WEU2 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Gm5866-201ENSMUST00000177881 973 ntBASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ccdc188F6WEU2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Fst-202ENSMUST00000223640 2612 ntBASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ccdc188F6WEU2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Gm45167-201ENSMUST00000208007 322 ntBASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc188F6WEU2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc188F6WEU2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc188F6WEU2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc188F6WEU2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc188F6WEU2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc188F6WEU2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc188F6WEU2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms