Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ube4aE9Q735 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ube4aE9Q735 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube4aE9Q735 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube4aE9Q735 Gm43514-201ENSMUST00000198852 424 ntBASIC19.99■□□□□ 0.79
Ube4aE9Q735 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.99■□□□□ 0.79
Ube4aE9Q735 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube4aE9Q735 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube4aE9Q735 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube4aE9Q735 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ube4aE9Q735 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube4aE9Q735 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ube4aE9Q735 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.99■□□□□ 0.79
Ube4aE9Q735 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ube4aE9Q735 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ube4aE9Q735 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ube4aE9Q735 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ube4aE9Q735 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ube4aE9Q735 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Ube4aE9Q735 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ube4aE9Q735 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ube4aE9Q735 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ube4aE9Q735 Gm18733-201ENSMUST00000173950 856 ntBASIC19.98■□□□□ 0.79
Ube4aE9Q735 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ube4aE9Q735 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ube4aE9Q735 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ube4aE9Q735 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ube4aE9Q735 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ube4aE9Q735 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ube4aE9Q735 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ube4aE9Q735 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ube4aE9Q735 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ube4aE9Q735 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4aE9Q735 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4aE9Q735 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4aE9Q735 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Ube4aE9Q735 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4aE9Q735 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4aE9Q735 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ube4aE9Q735 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4aE9Q735 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4aE9Q735 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.97■□□□□ 0.79
Ube4aE9Q735 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4aE9Q735 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC19.97■□□□□ 0.79
Ube4aE9Q735 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.97■□□□□ 0.79
Ube4aE9Q735 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.97■□□□□ 0.79
Ube4aE9Q735 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4aE9Q735 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4aE9Q735 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4aE9Q735 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4aE9Q735 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ube4aE9Q735 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4aE9Q735 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4aE9Q735 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4aE9Q735 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4aE9Q735 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4aE9Q735 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Ube4aE9Q735 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4aE9Q735 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4aE9Q735 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4aE9Q735 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4aE9Q735 Gm6376-201ENSMUST00000209407 580 ntBASIC19.96■□□□□ 0.79
Ube4aE9Q735 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4aE9Q735 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ube4aE9Q735 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4aE9Q735 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4aE9Q735 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ube4aE9Q735 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Gm7862-201ENSMUST00000121461 292 ntBASIC19.95■□□□□ 0.78
Ube4aE9Q735 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Gm44357-201ENSMUST00000195897 142 ntBASIC19.95■□□□□ 0.78
Ube4aE9Q735 Gm19658-201ENSMUST00000196231 138 ntBASIC19.95■□□□□ 0.78
Ube4aE9Q735 Gm44367-201ENSMUST00000196836 138 ntBASIC19.95■□□□□ 0.78
Ube4aE9Q735 Gm44350-201ENSMUST00000197197 138 ntBASIC19.95■□□□□ 0.78
Ube4aE9Q735 Gm44390-201ENSMUST00000197533 144 ntBASIC19.95■□□□□ 0.78
Ube4aE9Q735 Gm44313-201ENSMUST00000198018 138 ntBASIC19.95■□□□□ 0.78
Ube4aE9Q735 Gm44486-201ENSMUST00000198508 138 ntBASIC19.95■□□□□ 0.78
Ube4aE9Q735 Gm44314-201ENSMUST00000199263 138 ntBASIC19.95■□□□□ 0.78
Ube4aE9Q735 Gm44394-201ENSMUST00000199558 138 ntBASIC19.95■□□□□ 0.78
Ube4aE9Q735 Gm44484-201ENSMUST00000199873 138 ntBASIC19.95■□□□□ 0.78
Ube4aE9Q735 Gm44466-201ENSMUST00000200264 138 ntBASIC19.95■□□□□ 0.78
Ube4aE9Q735 Gm44359-201ENSMUST00000200671 138 ntBASIC19.95■□□□□ 0.78
Ube4aE9Q735 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.95■□□□□ 0.78
Ube4aE9Q735 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ube4aE9Q735 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms