Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdh17E9PXF0 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Mir3081-201ENSMUST00000175305 84 ntBASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdh17E9PXF0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pcdh17E9PXF0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh17E9PXF0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh17E9PXF0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh17E9PXF0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh17E9PXF0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh17E9PXF0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh17E9PXF0 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh17E9PXF0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh17E9PXF0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh17E9PXF0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.48■□□□□ 0.07
Pcdh17E9PXF0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh17E9PXF0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh17E9PXF0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh17E9PXF0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdh17E9PXF0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdh17E9PXF0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdh17E9PXF0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdh17E9PXF0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms