Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Gm18889-201ENSMUST00000174284 929 ntBASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Col6a3E9PWQ3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
Col6a3E9PWQ3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Gm4459-201ENSMUST00000118750 468 ntBASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Gm27618-201ENSMUST00000183671 60 ntBASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Gm4899-201ENSMUST00000178708 719 ntBASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col6a3E9PWQ3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col6a3E9PWQ3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Gm29791-202ENSMUST00000207888 369 ntBASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col6a3E9PWQ3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 Gm12151-201ENSMUST00000121374 290 ntBASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col6a3E9PWQ3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.6■□□□□ 0.25
Col6a3E9PWQ3 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a3E9PWQ3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a3E9PWQ3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a3E9PWQ3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Col6a3E9PWQ3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a3E9PWQ3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a3E9PWQ3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a3E9PWQ3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a3E9PWQ3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col6a3E9PWQ3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.6■□□□□ 0.25
Col6a3E9PWQ3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.6■□□□□ 0.25
Col6a3E9PWQ3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms