Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Hfm1D3Z4R1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Hfm1D3Z4R1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Hfm1D3Z4R1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hfm1D3Z4R1 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Hfm1D3Z4R1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
Hfm1D3Z4R1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC23.36■■□□□ 1.33
Hfm1D3Z4R1 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Hfm1D3Z4R1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC23.36■■□□□ 1.33
Hfm1D3Z4R1 Chchd1-203ENSMUST00000224633 557 ntBASIC23.36■■□□□ 1.33
Hfm1D3Z4R1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hfm1D3Z4R1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hfm1D3Z4R1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hfm1D3Z4R1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hfm1D3Z4R1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hfm1D3Z4R1 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hfm1D3Z4R1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Hfm1D3Z4R1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Hfm1D3Z4R1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Hfm1D3Z4R1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Hfm1D3Z4R1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Hfm1D3Z4R1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC23.35■■□□□ 1.33
Hfm1D3Z4R1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC23.35■■□□□ 1.33
Hfm1D3Z4R1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC23.35■■□□□ 1.33
Hfm1D3Z4R1 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Hfm1D3Z4R1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Hfm1D3Z4R1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Hfm1D3Z4R1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Hfm1D3Z4R1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Hfm1D3Z4R1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Hfm1D3Z4R1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Hfm1D3Z4R1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC23.35■■□□□ 1.33
Hfm1D3Z4R1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Hfm1D3Z4R1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.34■■□□□ 1.33
Hfm1D3Z4R1 H2af-ps-201ENSMUST00000119066 295 ntBASIC23.34■■□□□ 1.33
Hfm1D3Z4R1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Hfm1D3Z4R1 Mir8117-201ENSMUST00000184773 107 ntBASIC23.34■■□□□ 1.33
Hfm1D3Z4R1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hfm1D3Z4R1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hfm1D3Z4R1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hfm1D3Z4R1 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hfm1D3Z4R1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC23.34■■□□□ 1.33
Hfm1D3Z4R1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hfm1D3Z4R1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Hfm1D3Z4R1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Hfm1D3Z4R1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Hfm1D3Z4R1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC23.33■■□□□ 1.33
Hfm1D3Z4R1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC23.33■■□□□ 1.33
Hfm1D3Z4R1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Hfm1D3Z4R1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC23.33■■□□□ 1.33
Hfm1D3Z4R1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC23.33■■□□□ 1.33
Hfm1D3Z4R1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Hfm1D3Z4R1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Hfm1D3Z4R1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
Hfm1D3Z4R1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Hfm1D3Z4R1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC23.33■■□□□ 1.33
Hfm1D3Z4R1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC23.33■■□□□ 1.33
Hfm1D3Z4R1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC23.33■■□□□ 1.32
Hfm1D3Z4R1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Hfm1D3Z4R1 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC23.33■■□□□ 1.32
Hfm1D3Z4R1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Hfm1D3Z4R1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.32
Hfm1D3Z4R1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC23.33■■□□□ 1.32
Hfm1D3Z4R1 AC107711.5-202ENSMUST00000226429 702 ntBASIC23.33■■□□□ 1.32
Hfm1D3Z4R1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Hfm1D3Z4R1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Hfm1D3Z4R1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC23.32■■□□□ 1.32
Hfm1D3Z4R1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Hfm1D3Z4R1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Hfm1D3Z4R1 Gm5953-201ENSMUST00000220644 2616 ntBASIC23.32■■□□□ 1.32
Hfm1D3Z4R1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
Hfm1D3Z4R1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Hfm1D3Z4R1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Hfm1D3Z4R1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Hfm1D3Z4R1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC23.32■■□□□ 1.32
Hfm1D3Z4R1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Hfm1D3Z4R1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Hfm1D3Z4R1 Ddx41-204ENSMUST00000224765 2199 ntBASIC23.31■■□□□ 1.32
Hfm1D3Z4R1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Hfm1D3Z4R1 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Hfm1D3Z4R1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Hfm1D3Z4R1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Hfm1D3Z4R1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Hfm1D3Z4R1 Gm11764-201ENSMUST00000120221 623 ntBASIC23.31■■□□□ 1.32
Hfm1D3Z4R1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC23.31■■□□□ 1.32
Hfm1D3Z4R1 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC23.31■■□□□ 1.32
Hfm1D3Z4R1 AC159106.1-201ENSMUST00000224421 690 ntBASIC23.31■■□□□ 1.32
Hfm1D3Z4R1 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Hfm1D3Z4R1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Hfm1D3Z4R1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Hfm1D3Z4R1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Hfm1D3Z4R1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC23.3■■□□□ 1.32
Hfm1D3Z4R1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC23.3■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms