Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Syce3B5KM66 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.16■□□□□ 0.66
Syce3B5KM66 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Syce3B5KM66 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Syce3B5KM66 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Syce3B5KM66 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.16■□□□□ 0.66
Syce3B5KM66 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.16■□□□□ 0.66
Syce3B5KM66 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syce3B5KM66 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Syce3B5KM66 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syce3B5KM66 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Syce3B5KM66 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Syce3B5KM66 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Syce3B5KM66 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.15■□□□□ 0.66
Syce3B5KM66 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syce3B5KM66 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.15■□□□□ 0.66
Syce3B5KM66 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.15■□□□□ 0.66
Syce3B5KM66 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syce3B5KM66 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syce3B5KM66 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Syce3B5KM66 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Syce3B5KM66 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syce3B5KM66 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Syce3B5KM66 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Syce3B5KM66 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syce3B5KM66 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syce3B5KM66 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syce3B5KM66 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syce3B5KM66 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Syce3B5KM66 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Syce3B5KM66 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.14■□□□□ 0.66
Syce3B5KM66 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Syce3B5KM66 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Syce3B5KM66 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Syce3B5KM66 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.14■□□□□ 0.65
Syce3B5KM66 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Syce3B5KM66 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Syce3B5KM66 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Syce3B5KM66 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Syce3B5KM66 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Syce3B5KM66 Gm10138-203ENSMUST00000206952 366 ntBASIC19.14■□□□□ 0.65
Syce3B5KM66 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.14■□□□□ 0.65
Syce3B5KM66 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
Syce3B5KM66 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Syce3B5KM66 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Syce3B5KM66 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.14■□□□□ 0.65
Syce3B5KM66 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Syce3B5KM66 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Syce3B5KM66 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.14■□□□□ 0.65
Syce3B5KM66 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syce3B5KM66 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syce3B5KM66 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Syce3B5KM66 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.13■□□□□ 0.65
Syce3B5KM66 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syce3B5KM66 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syce3B5KM66 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Syce3B5KM66 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.13■□□□□ 0.65
Syce3B5KM66 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syce3B5KM66 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.13■□□□□ 0.65
Syce3B5KM66 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Syce3B5KM66 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Syce3B5KM66 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.13■□□□□ 0.65
Syce3B5KM66 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syce3B5KM66 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syce3B5KM66 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Syce3B5KM66 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syce3B5KM66 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syce3B5KM66 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syce3B5KM66 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Syce3B5KM66 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Syce3B5KM66 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Syce3B5KM66 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Syce3B5KM66 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Syce3B5KM66 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Syce3B5KM66 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Syce3B5KM66 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Syce3B5KM66 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.12■□□□□ 0.65
Syce3B5KM66 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Syce3B5KM66 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Syce3B5KM66 Gm15375-201ENSMUST00000119510 849 ntBASIC19.12■□□□□ 0.65
Syce3B5KM66 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.12■□□□□ 0.65
Syce3B5KM66 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Syce3B5KM66 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Syce3B5KM66 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Syce3B5KM66 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Syce3B5KM66 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Syce3B5KM66 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Syce3B5KM66 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Syce3B5KM66 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Syce3B5KM66 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Syce3B5KM66 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Syce3B5KM66 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Syce3B5KM66 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Syce3B5KM66 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Syce3B5KM66 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Syce3B5KM66 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Syce3B5KM66 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.11■□□□□ 0.65
Syce3B5KM66 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.11■□□□□ 0.65
Syce3B5KM66 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Syce3B5KM66 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms