Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Gm9013-201ENSMUST00000132939 882 ntBASIC19.51■□□□□ 0.71
Usp42B2RQC2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.51■□□□□ 0.71
Usp42B2RQC2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.51■□□□□ 0.71
Usp42B2RQC2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Usp42B2RQC2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp42B2RQC2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp42B2RQC2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Usp42B2RQC2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp42B2RQC2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Usp42B2RQC2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp42B2RQC2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp42B2RQC2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Usp42B2RQC2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Usp42B2RQC2 Gm23634-201ENSMUST00000175071 91 ntBASIC19.5■□□□□ 0.71
Usp42B2RQC2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.5■□□□□ 0.71
Usp42B2RQC2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.5■□□□□ 0.71
Usp42B2RQC2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp42B2RQC2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp42B2RQC2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp42B2RQC2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp42B2RQC2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp42B2RQC2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp42B2RQC2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp42B2RQC2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp42B2RQC2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp42B2RQC2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp42B2RQC2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Usp42B2RQC2 Gm5587-201ENSMUST00000206270 674 ntBASIC19.49■□□□□ 0.71
Usp42B2RQC2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.49■□□□□ 0.71
Usp42B2RQC2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Usp42B2RQC2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp42B2RQC2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.49■□□□□ 0.71
Usp42B2RQC2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp42B2RQC2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp42B2RQC2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp42B2RQC2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp42B2RQC2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp42B2RQC2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Usp42B2RQC2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.48■□□□□ 0.71
Usp42B2RQC2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Usp42B2RQC2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp42B2RQC2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp42B2RQC2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
Usp42B2RQC2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp42B2RQC2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.48■□□□□ 0.71
Usp42B2RQC2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.48■□□□□ 0.71
Usp42B2RQC2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp42B2RQC2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Usp42B2RQC2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.47■□□□□ 0.71
Usp42B2RQC2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.47■□□□□ 0.71
Usp42B2RQC2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.47■□□□□ 0.71
Usp42B2RQC2 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.47■□□□□ 0.71
Usp42B2RQC2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp42B2RQC2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp42B2RQC2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms