Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Gm5682-201ENSMUST00000173402 505 ntBASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Gm9172-201ENSMUST00000212092 954 ntBASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.13■□□□□ 0.33
Col4a6B1AVK5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col4a6B1AVK5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a6B1AVK5 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a6B1AVK5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a6B1AVK5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a6B1AVK5 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a6B1AVK5 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.12■□□□□ 0.33
Col4a6B1AVK5 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a6B1AVK5 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a6B1AVK5 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a6B1AVK5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a6B1AVK5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a6B1AVK5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.12■□□□□ 0.33
Col4a6B1AVK5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a6B1AVK5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col4a6B1AVK5 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.11■□□□□ 0.33
Col4a6B1AVK5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a6B1AVK5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a6B1AVK5 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a6B1AVK5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.11■□□□□ 0.33
Col4a6B1AVK5 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.11■□□□□ 0.33
Col4a6B1AVK5 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.11■□□□□ 0.33
Col4a6B1AVK5 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.11■□□□□ 0.33
Col4a6B1AVK5 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a6B1AVK5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a6B1AVK5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a6B1AVK5 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a6B1AVK5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a6B1AVK5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a6B1AVK5 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a6B1AVK5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col4a6B1AVK5 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Gm24513-201ENSMUST00000174964 138 ntBASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Gm14822-201ENSMUST00000122247 291 ntBASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col4a6B1AVK5 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Col4a6B1AVK5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a6B1AVK5 Gm7222-201ENSMUST00000117512 906 ntBASIC17.08■□□□□ 0.32
Col4a6B1AVK5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a6B1AVK5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.08■□□□□ 0.32
Col4a6B1AVK5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col4a6B1AVK5 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.08■□□□□ 0.32
Col4a6B1AVK5 Gm37500-201ENSMUST00000192059 1443 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms