Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm11127A7VMS2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm11127A7VMS2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm11127A7VMS2 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Gm11127A7VMS2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm11127A7VMS2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gm11127A7VMS2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm11127A7VMS2 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gm11127A7VMS2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Gm11127A7VMS2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Mir2861-201ENSMUST00000175539 82 ntBASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gm11127A7VMS2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Gm10418-201ENSMUST00000100943 576 ntBASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Gm11127A7VMS2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gm11127A7VMS2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms