Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm38342-201ENSMUST00000195710 2980 ntBASIC8.78□□□□□ -1
Ubr4A2AN08 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC8.78□□□□□ -1
Ubr4A2AN08 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 Gm8655-201ENSMUST00000221159 852 ntBASIC8.78□□□□□ -1
Ubr4A2AN08 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ubr4A2AN08 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC8.78□□□□□ -1
Ubr4A2AN08 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC8.77□□□□□ -1
Ubr4A2AN08 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Ubr4A2AN08 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
Ubr4A2AN08 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1
Ubr4A2AN08 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC8.77□□□□□ -1
Ubr4A2AN08 Gm22902-201ENSMUST00000158488 302 ntBASIC8.77□□□□□ -1
Ubr4A2AN08 Gm6473-201ENSMUST00000188572 1210 ntBASIC8.77□□□□□ -1
Ubr4A2AN08 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC8.77□□□□□ -1
Ubr4A2AN08 Gm37714-201ENSMUST00000194742 342 ntBASIC8.77□□□□□ -1
Ubr4A2AN08 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC8.77□□□□□ -1
Ubr4A2AN08 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC8.77□□□□□ -1
Ubr4A2AN08 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC8.77□□□□□ -1
Ubr4A2AN08 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Gm42900-201ENSMUST00000197184 2167 ntBASIC8.77□□□□□ -1.01
Ubr4A2AN08 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Gm11478-201ENSMUST00000117851 599 ntBASIC8.77□□□□□ -1.01
Ubr4A2AN08 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Gm44608-201ENSMUST00000206827 855 ntBASIC8.77□□□□□ -1.01
Ubr4A2AN08 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ubr4A2AN08 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Syt7-205ENSMUST00000224135 1557 ntBASIC8.76□□□□□ -1.01
Ubr4A2AN08 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Gm37748-201ENSMUST00000194379 1140 ntBASIC8.76□□□□□ -1.01
Ubr4A2AN08 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Gm5357-201ENSMUST00000212720 1924 ntBASIC8.76□□□□□ -1.01
Ubr4A2AN08 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Gm10253-201ENSMUST00000194270 940 ntBASIC8.76□□□□□ -1.01
Ubr4A2AN08 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Rprl2-201ENSMUST00000157150 290 ntBASIC8.76□□□□□ -1.01
Ubr4A2AN08 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC8.76□□□□□ -1.01
Ubr4A2AN08 AY702102-202ENSMUST00000194651 1173 ntBASIC8.76□□□□□ -1.01
Ubr4A2AN08 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Wnt10b-204ENSMUST00000226655 1807 ntBASIC8.76□□□□□ -1.01
Ubr4A2AN08 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ubr4A2AN08 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ubr4A2AN08 Gm38308-201ENSMUST00000194934 1809 ntBASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms